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. 2019 Aug 28;47(19):10388–10399. doi: 10.1093/nar/gkz744

Table 1.

DNA used for crystallization and assays.

ID Length (nt) Sequence Experiments
ssDNA 10 5′-CGGTCGATTC-3′ Crystallization, crosslinking assays, and ITC
ssDNA_THF 10 5′-CGGT(THF)GATTC-3′ Crystallization and ITC
ssDNA_dU 10 5′-CGGT(dU)GATTC-3′ Crystallization and crosslinking assays
ssDNA_polyA 11 5′-AAAAA(dU)AAAAA-3′ Crystallization
ssDNA2_dU 10 5′-GATTC(dU)GTCG-3′ Crystallization
3′ junction 31 + 15 5′-ATGACTCTTCTGGTC(THF)GGATGGTAGTTAAGT-3′ ITC
5′-ACTTAACTACCATCC-3′
5′ junction 31 + 15 5′-ATGACTCTTCTGGTC(THF)GGATGGTAGTTAAGT-3′ ITC
5′-GACCAGAAGAGTCAT-3′