TABLE 4.
Primers used for Inc typing
Primer | Sequence | Reference |
---|---|---|
IncHI2_fw | TTT CTC CTG AGT CAC CTG TTA ACA C | Carattoli et al. (40) |
IncHI2_rev | GGC TCA CTA CCG TTG TCA TCC T | Carattoli et al. (40) |
IncA/C_fw | GAG AAC CAA AGA CAA AGA CCT GGA | Carattoli et al. (40) |
IncA/C_rev | ACG ACA AAC CTG AAT TGC CTC CTT | Carattoli et al. (40) |
IncL_fw | CGG AAC CGA CAT GTG CCT ACT | Carattoli et al. (41) |
IncM_fw | GGA TGA AAA CTA TCA GCA TCT GAA G | Carattoli et al. (41) |
IncL/M_rev | GAA CTC CGG CGA AAG ACC TTC | Carattoli et al. (41) |
IncI1-αγ_fw | CGA AAG CCG GAC GGC AGA A | Carattoli et al. (40) |
IncI1-αγ_rev | TCG TCG TTC CGC CAA GTT CGT | Carattoli et al. (40) |
IncN_fw | GTC TAA CGA GCT TAC CGA AG | Carattoli et al. (40) |
IncN_rev | GTT TCA ACT CTG CCA AGT TC | Carattoli et al. (40) |
IncFIIk_fw | TCT TCT TCA ATC TTG GCG GA | Villa et al. (39) |
IncFIIk_rev | GCT TAT GTT GCA CRG AAG GA | Villa et al. (39) |
IncFIA_fw | CCA TGC TGG TTC TAG AGA AGG TG | Carattoli et al. (40) |
IncFIA_rev | GTA TAT CCT TAC TGG CTT CCG CAG | Carattoli et al. (40) |
IncFIB_fw | TCT GTT TAT TCT TTT ACT GTC CAC | Villa et al. (39) |
IncFIB_rev | CTC CCG TCG CTT CAG GGC ATT | Villa et al. (39) |
IncFII_fw | CTG ATC GTT TAA GGA ATT TT | Villa et al. (39) |
IncFII_rev | CAC ACC ATC CTG CAC TTA | Villa et al. (39) |