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. 2019 Oct 31;20:226. doi: 10.1186/s13059-019-1834-9

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Completeness and contamination statistics for bins recovered from assembly and binning of shallow-sequenced mouse metagenomes. Longitudinal samples for each mother (Mothers) or for each litter (Offspring) were coassembled. “Compositional only” bins were calculated using pooled reads from each longitudinal sample per individual, simulating low-N, high-depth sequencing. “Compositional and alignment” bins were calculated using differential coverage data obtained by mapping each longitudinal sample independently to its individual coassembly