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. Author manuscript; available in PMC: 2019 Nov 1.
Published in final edited form as: J Multivar Anal. 2019 Feb 8;173:38–50. doi: 10.1016/j.jmva.2019.01.006

Table 3.

Simulation results from 1000 simulated case-control samples taken from a population with a disease rate of approximately 4.5%, and independent genetic and environmental variables, under the logistic model with gene–environment interaction. The results for GB (0.6) and XG (20, 1) is displayed on the left whereas the results for G ~ N N(0, 1) and X ~ G (20, 1) is on the right. Each replicate contains N1 = 1000 cases and N0 = 1000 controls, and is analyzed through two approaches, (1) “Logistic” is ordinary logistic regression, and (2) “Semi” is our semiparametric efficient estimator. Here, we list the sample mean (“mean”), the sample standard error (“se”), the mean estimated standard error (“est se”) and the coverage for the nominal 95% confidence intervals (“95%”) for both methods. In addition, we computed the mean squared error efficiency of the “Semi” method compared to the “Logistic” approach.

Binary G, Gamma X Normal G, Gamma X
β 3.577 0.080 −0.141 3.577 0.080 −0.141
Logistic Mean 3.599 0.081 −0.142 3.592 0.080 −0.141
se 0.456 0.018  0.022 0.269 0.012  0.012
est se 0.462 0.018  0.022 0.259 0.012  0.012
95% 0.957 0.953  0.949 0.937 0.950  0.942
Semi Mean 3.586 0.080 −0.141 3.569 0.080 −0.140
se 0.375 0.016  0.018 0.230 0.011  0.010
est se 0.369 0.016  0.017 0.202 0.011  0.009
95% 0.950 0.949  0.942 0.914 0.940  0.919
MSE Eff 1.484 1.305  1.559 1.372 1.059  1.437