Figure 6.

Network analyses for the differentially expressed genes (DEGs). (A) Scatter plot of the GGM network edges (partial correlation) for the DE genes. Each red dot represents $-lo{g}_{10}\left(\text{BH}p\right)$ of an edge in bronchial tissue (horizontal axis) versus nasal tissue (vertical axis). In light black: the critical value at BH $p\le \mathrm{0.01.}$ The figure displays the respective gene pairs for the most similar edges. (B) The 50 most significant GOs for the set of Overlapped genes. The panel displays the corresponding mean $-lo{g}_{10}$ (p-values), and error bars represent +2 standard errors over the 500 random samples.