Up-regulated genes
|
1. |
Synaptophysin/major synaptic vesicle protein p38 (SYP) |
[10,81] |
2. |
Chromogranin A and B (CHGA/CHGB) |
[10,81] |
3. |
Aurora kinase A (AURKA) |
[10,65] |
4. |
Neuroblastoma-derived v-myc avian myelocytomatosis viral related oncogene (N-MYC) |
[10,65,85] |
5. |
Enhancer Of Zeste 2 Polycomb Repressive Complex 2 Subunit (EZH2) |
[53,74,85,86] |
6. |
Neuron-specific enolase (NSE/ENO2) |
[10,81,87] |
7. |
Calcitonin (CALC1) |
[88,89] |
8. |
Secretogranin II (SCG2) and III (SCG3) |
[45,90,91] |
9. |
Vasoactive Intestinal Peptide (VIP) |
[92] |
10. |
Gastrin Releasing Peptide (GRP) |
[93] |
11. |
NK2 homeobox 1 (NKX2.1)/Thyroid transcription factor 1 (TTF-1) and NKX2.2 |
[94,95,96] |
12. |
Neural cell adhesion molecule (NCAM1/CD56) |
[48,97] |
13. |
Forkhead Box A2 (FOXA2) |
[98,99,100,101] |
14. |
WNT11
|
[102] |
15. |
POU Class 3 Homeobox 2 (POU3F2/BRN2) |
[103,104] |
16. |
Serine/Arginine Repetitive Matrix 4 (SRRM4) (RNA splicing factor) |
[45,46,105] |
17. |
Sex Determining Region Y (SRY)-Box 2 (SOX2) and SOX11
|
[23,57,96,103,106] |
18. |
Carcinoembryonic antigen-related cell adhesion molecule 5 (CEACAM5) or CD63E |
[107] |
19. |
human achaete-scute homolog 1 (ASH1/ASCL1) |
[108,109] |
20. |
Paternally expressed10 (PEG10) |
[86,110,111] |
21. |
TMPRSS2-ERG gene rearrangement |
[67,112,113] |
22. |
P16 or cyclin-dependent kinase inhibitor 2A |
[71] |
23. |
Delta-like protein 3 (DLL3) |
[114] |
Gene loss/Down-regulated genes
|
1. |
Androgen receptor (AR) |
[10] |
2. |
Prostate-specific antigen/ kallikrein-3 (PSA/KLK3) |
[10] |
3. |
Retinoblastoma tumor-suppressor gene (RB1) and TP53 |
[48,57,72,74] |
4. |
Forkhead Box A1(FOXA1) |
[87] |
5. |
PTEN/AKT1
|
[72,85,115] |
6. |
RE1 Silencing Transcription Factor (REST) |
[45,116,117] |
7. |
Tumor suppressor CYLD
|
[48] |
8. |
SAM pointed domain-containing ETS transcription factor (SPDEF) |
[48,118,119] |
9. |
Cyclin D1
|
[71] |