Table 1.
Characteristics of the CSIs specific for the Genus Caenorhabditis.
| Protein Name | C. elegans Gene Name | Accession No. | Figure No. | Indel Size | Indel Position |
|---|---|---|---|---|---|
| Rab44 | 4R79.2 | AFP33163 | Figure 2A, Figure S2A | 1 aa ins | 233–263 |
| Poly ADP-ribose Glycohydrolase | parg-1 | NP_001255324 | Figure 2B, Figure S2B | 5 aa ins | 411–454 |
| Poly (ADP-ribose) polymerase 2 | parp-2 | NP_001022057 | Figure S3 | 2 aa del | 389–420 |
| DnaJ-domain containing chaperone protein | dnj-16 | OZF80352 | Figure S4 | 1 aa del | 186–207 |
| Cyclin-dependent kinase 12 | cdk-12 | NP_001254914 | Figure S5 | 1 aa del | 456–487 |
| CRAL-TRIO domain-containing Sec14 protein | T23G5.2 | NP_001040875 | Figure S6 | 2 aa ins | 448–487 |
| Mammalian ZAK kinase homolog | zak-1 | NP_001254942 | Figure S7 | 1 aa ins | 80–109 |
| Probable 3',5'-cyclic phosphodiesterase | pde-2 | NP_001022706 | Figure S8 | 2 aa ins | 448–495 |
| Nuclear Hormone Receptor | nhr-68 | NP_001256335 | Figure S9 | 1 aa del | 1–35 |
| SMA2- like | sma-1 | NP_001256383 | Figure S10 | 2 aa ins | 1353–1393 |
| Glutathione transferase omega-1 * | C02D5.4 | NP_001254962 | Figure S11 | 1 aa ins | 65–103 |
| Probable 26S proteasome regulatory subunit | rpn-6.2 | NP_001254973 | Figure S12 | 1 aa ins | 46–90 |
| Serine/ Threonine protein phosphatase 2A Regulatory Subunit | pptr-2 | NP_001256283 | Figure S13 | 1 aa ins | 92–130 |
| Failed axon connections-like protein * | F53G12.9 | NP_001293265 | Figure S14 | 1 aa ins | 176–211 |
| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 | Y116A8C.30 | XP_002632399 | Figure S15 | 13 aa ins | 62–97 |
| Disorganized muscle protein 1 | Cbn-dim-1 | EGT45899 | Figure S16 | 1 aa del | 135–170 |
| ETS (E26 transformation-specific) class transcription factor | ets-9 | NP_001024482 | Figure S17 | 1 aa ins | 54–78 |
| Glycine-rich domain-containing protein | F32B5.7 | EGT38541 | Figure S18 | 1 aa ins | 430–466 |
| Heat shock protein 70 | F11F1.1 | NP_001255199 | Figure S19 | 2 aa del | 364–399 |
| Heat shock protein 70 | F11F1.1 | NP_001255199 | Figure S20 | 1 aa del | 437–481 |
| Abnormal cell migration protein 13 | mig-13 | NP_001024661 | Figure S21 | 1 aa del | 123–151 |
| Regulatory-associated protein of mTOR-like protein | daf-15 | XP_003089575 | Figure S22 | 1 aa ins | 143–175 |
| Abnormal cell migration protein 13 | mig-13 | NP_001024661 | Figure S23 | 3 aa del | 141–170 |
| Abnormal cell migration protein 13 | mig-13 | NP_001024660 | Figure S24 | 1 aa del | 220–251 |
| Plexin | plx-1 | NP_500018 | Figure S25 | 1 aa ins | 1460–1497 |
| Piwi-like protein * | ergo-1 | NP_503362 | Figure S26 | 1 aa ins | 1020–1070 |
| Stomatin * | sto-1 | NP_001123124 | Figure S27 | 1 aa del | 70–99 |
| Ral guanine nucleotide dissociation stimulator | rgl-1 | NP_001123140 | Figure S28 | 1 aa del | 257–290 |
| Transglutaminase/ protease homolog | ltd-1 | NP_001309573 | Figure S29 | 1 aa del | 261–290 |
| Vacuolar protein sorting-associated protein 41 homolog | vps-41 | NP_001033544 | Figure S30 | 1 aa ins | 209–242 |
| Serine/arginine-rich splicing factor | rsp-1 | NP_001317731 | Figure S31 | 1 aa del | 13–36 |
| Serine/ Threonine-protein phosphatase PP1 | Cni-W03D8.2 | PIC40784 | Figure S32 | 1 aa ins | 159–191 |
| NEPrilysin metallopeptidase * | nep-20 | NP_001317749 | Figure S33 | 1 aa del | 761–804 |
| DNA PRImase homolog | pri-2 | NP_001251923 | Figure S34 | 1 aa ins | 224–262 |
| Probable maleylacetoacetate isomerase | Y105E8A.21 | NP_001252372 | Figure S35 | 3 aa del | 56–91 |
| Glutathione S-transferase * | C25H3.7 | NP_001254102 | Figure S36 | 1 aa ins | 39–61 |
| CTD nuclear envelope phosphatase 1 homolog | cnep-1 | NP_001254124 | Figure S37 | 1 aa ins | 32–52 |
| Kelch-domain protein | F53E4.1 | NP_506895 | Figure S38 | 6 aa ins | 206–248 |
| Intermediate filament protein * | ifc-2 | NP_741705 | Figure S39 | 2 aa del | 946-983 |
* Two isoforms of this protein are present in Caenorhabditis species.