5caC |
5-carbocylcytosine |
5fC |
5-formylcytosine |
5hmC |
5-hydroxymethylcytosine |
5hmU |
5-hydroxymethyluracil |
5mC |
5-methylcytosine |
6mA |
6-methyladenine |
AID |
activation-induced deaminase |
Ala |
alanine |
APOBEC |
apolipoprotein B mRNA-editing enzyme complex |
Asp |
aspartic acid |
ATP |
adenosine triphosphate |
BACH2 |
broad complex-tramtrack-bric a brac and Cap’n’collar homology 2 |
BCL2 |
B cell lymphoma 2 |
BER |
base excision repair |
bp |
base pair |
BRCA1 |
breast cancer 1 |
C |
cytosine |
CH3 |
methyl group |
ChIP |
chromatin immunoprecipitation |
CpG |
cytosine-guanine dinucleotide |
CRISPR |
clustered regulatory interspaced short palindromic repeats |
crRNA |
CRISPR RNA |
dCas9 |
deactivated Cas9 |
DNA |
deoxyribonucleic acid |
DNMT |
DNA methyltransferase |
DNMTi |
DNA methyltransferase inhibitor |
EBF3 |
early B cell factor 3 |
FMR1 |
fragile X mental retardation 1 |
FoxP3 |
Forkhead box P3 |
G |
guanine |
GATA4 |
GATA binding protein 4 |
Gly |
glycine |
GPR17 |
G protein-coupled receptor 17 |
gRNA |
guide RNA |
HIF-1α |
hypoxia-inducible factor 1-alpha |
His |
histidine |
HOXA |
homeobox A |
HOXD12 |
homeobox D12 |
hTERT |
human telomerase reverse transcriptase |
Igf2/H19 |
insulin-like growth factor 2/H19 |
KRAB |
Krupple-associated box |
MAGE |
melanoma antigen gene |
MGMT |
O-6-methylguanine-DNA methyltransferases |
mRNA |
messenger RNA |
MTase |
methyltransferase |
MyoD |
myoblast determination protein 1 |
p16/CDKN2A |
p16INK4a/cyclin-dependent kinase inhibitor 2A |
PAM |
protospacer adjacent motif |
PCR |
polymerase chain reaction |
RASSF1A |
Ras association domain-containing protein 1 |
RB |
retinoblastoma |
RNA |
ribonucleic acid |
RNA-seq |
RNA-sequencing |
ROS1CD |
ROS1 5mC DNA glycosylase |
RT-qPCR |
quantitative reverse transcription PCR |
SAH |
S-adenosyl-homocysteine |
SAM |
S-adenosyl-L-methionine |
Ser |
serine |
sgRNA |
single-guide RNA |
SMRT |
single-molecule real-time |
SunTag |
SUperNova TAGging |
TALE |
transcription activator-like effector |
TDG |
thymine DNA glycosylase |
TET |
ten-eleven translocation |
TIMP2 |
tissue inhibitor of metalloproteinases 2 |
tracrRNA |
trans-activating CRISPR RNA |
UHRF1 |
ubiquitin-like containing PHD and RING finger domains 1 |
VEGF-2 |
vascular endothelial growth factor 2 |
VHL |
Von Hippel-Lindau |
WT1 |
Wilms tumor 1 |
ZNF |
zinc finger |