Table 1.
Summary of phage-related regions identified by PHASTER in the B18-123 genome
| Region | Length of prophage (kb) | Completeness | PHASTER score | No. of total proteins | Region position | Most common phage | GC content (%) |
Location on scaffolds |
|---|---|---|---|---|---|---|---|---|
| 1 | 69.2 | Intact | 150 | 93 | 294078–363300 | PHAGE_Clostr_phiMMP02_NC_019421 (26) | 28.18 | NODE001 |
| 6 | 44.8 | Intact | 140 | 66 | 1–44849 | PHAGE_Clostr_phiCDHM19_NC_028996 (21) | 28.25 | NODE021 |
| 7 | 40.4 | Intact | 125 | 48 | 48–40472 | PHAGE_Clostr_phiCD111_NC_028908 (46) | 30.88 | NODE022 |
All contigs were merged into a single continuous sequence on PHASTER (http://phaster.ca/). B18-123 genome also contained three incomplete and one questionable prophage sequences (scores < 90)