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. 2019 Nov 4;9:15972. doi: 10.1038/s41598-019-52340-0

Table 1.

Initial rates of cleavage and extent digestion of dU49 by UDG/APE1.

[Mg2+] (mM) Substrate k (% cleaved per minute)
0.2 mM 12-601-dU 24.8 ± 2.6
1-NCP-dU 4.6 ± 0.3a
12-NCP-dU 4.7 ± 0.8a
1-NCP(18ac)-dU 5.6 ± 0.8a
12-NCP(18ac)-dU 6.4 ± 0.4a
1-NCP(27ac)-dU 2.4 ± 0.5a,b
12-NCP(27ac)-dU 1.5 ± 0.6a,b
2.0 mM 12-601-dU 86.2 ± 9.8
1-NCP-dU 8.2 ± 0.8a
12-NCP-dU 6.8 ± 0.8a
1-NCP(18ac)-dU 8.2 ± 1.4a
12-NCP(18ac)-dU 6.9 ± 1.0a
1-NCP(27ac)-dU 9.1 ± 1.0a
12-NCP(27ac)-dU 6.0 ± 0.9a

Initial rates were calculated by fitting the digestion data in Fig. 3 to a single phase exponential and multiplying each rate constant by the Ymax as previously described12,63. aP < 0.05 compared to naked DNA. bP < 0.05 compared to non-acetylated substrate.