Table 1.
Features and genomic quality of all the genomes studied in this article
| Feature | Genome size (bp) | G + C (%) | Scaffolds | Genes | CRISPR | Source | Accession number | Metagenome bin | Completeness (%) | Contamination (%) |
|---|---|---|---|---|---|---|---|---|---|---|
| Akkermansia muciniphila ATCC BAA-835T | 2,664,102 | 55.8 | 1 | 2321 | 2 | Human feces | GCA_000020225.1 | No | ||
| Akkermansia glycaniphila APytTT | 3,074,078 | 57.6 | 1 | 2575 | 4 | APytT | GCA_900097105.1 | No | ||
| Akkermansia muciniphila YL44 | 2,745,278 | 55.7 | 1 | 2413 | 2 | Mouse | GCA_001688765.2 | No | ||
| Akkermansia muciniphila Urmite | 2,664,738 | 55.7 | 1 | 2307 | 0 | Human stool | GCA_000723745.2 | Yes | 96.599 | 0 |
| Akkermansia sp. KLE1797 | 3,109,783 | 56.9 | 51 | 2642 | 8 | Human feces | GCA_001578645.1 | No | ||
| Akkermansia sp. KLE1798 | 3,113,726 | 56.9 | 40 | 2636 | 11 | Human feces | GCA_001580195.1 | No | ||
| Akkermansia sp. KLE1605 | 3,108,219 | 56.9 | 54 | 2632 | 12 | Human GI tract | GCA_001647615.1 | No | ||
| Akkermansia muciniphila An78 | 2,736,972 | 55.7 | 10 | 2385 | 1 | Chicken caecum | GCA_002161325.1 | No | ||
| Akkermansia muciniphila (Horse) | 2,774,487 | 55.7 | 90 | 2438 | 2 | Horse | GCA_900184855.1 | No | ||
| Akkermansia muciniphila (Siamang) | 2,652,501 | 55.8 | 110 | 2333 | 2 | Siamang | GCA_900184905.1 | No | ||
| Akkermansia muciniphila (Mouse) | 2,715,564 | 55.6 | 130 | 2460 | 2 | Mouse | GCA_900184985.1 | No | ||
| Akkermansia muciniphila (Pig) | 2,807,935 | 55.8 | 70 | 2456 | 2 | Pig | GCA_900185065.1 | No | ||
| Akkermansia muciniphila (Chimpanzee) | 2,615,504 | 55.7 | 77 | 2298 | 2 | Chimpanzee | GCA_900184845.1 | No | ||
| Akkermansia muciniphila (Reindeer) | 2,672,402 | 55.8 | 104 | 2350 | 2 | Reindeer | GCA_900185005.1 | No | ||
| Akkermansia muciniphila (Elephant) | 2,674,166 | 55.7 | 188 | 2364 | 2 | Elephant | GCA_900185045.1 | No | ||
| Akkermansia muciniphila CAG:154 | 2,721,828 | 55.5 | 81 | 2431 | 1 | Human gut metagenome | GCA_000436395.1 | Yes | 97.072 | 0 |
| Akkermansia sp. CAG:344 | 3,024,253 | 58.1 | 78 | 2577 | 3 | Human gut metagenome | GCA_000437075.1 | Yes | 97.249 | 1.361 |
| Akkermansia sp. UNK.MGS-1 | 2,770,805 | 55 | 40 | 2487 | 2 | Human stool samples | GCA_000980515.1 | Yes | 92.063 | 3.401 |
| Akkermansia sp. 54_46 | 2,966,498 | 55.3 | 36 | 2586 | 4 | Human gut metagenome | GCA_001917295.1 | Yes | 97.279 | 0 |
| Akkermansia sp. Phil8 | 2,437,735 | 55.3 | 37 | 2126 | 3 | Phil the wombat | GCA_001940945.1 | Yes | 88.435 | 0.68 |
| Akkermansia sp. UBA3271 | 2,450,463 | 56 | 37 | 2127 | 4 | Rat gut metagenome | GCA_002362435.1 | Yes | 95.872 | 0.68 |
| Akkermansia sp. UBA7059 | 2,439,829 | 56.1 | 31 | 2103 | 2 | Rat gut metagenome | GCA_002492685.1 | Yes | 97.612 | 0 |
| Akkermansia sp. UBA7090 | 2,447,227 | 56.2 | 31 | 2102 | 2 | Rat gut metagenome | GCA_002493465.1 | Yes | 97.732 | 0 |
| Rubritalea squalenifaciens DSM 18772T | 4,322,488 | 52 | 17 | 3884 | 0 | Marine sponge | GCA_900141815.1 | No | ||
| Rubritalea marina DSM 17716T | 3,013,271 | 51.6 | 30 | 2650 | 0 | Mediterranean sponge | GCA_000378105.1 | No | ||
| Verrucomicrobium spinosum DSM 4136T | 8,220,857 | 60.3 | 1 | 6420 | 2 | Soil | GCA_000172155.1 | No | ||
| Terrimicrobium sacchariphilum NM-5T | 4,751,807 | 60.2 | 3 | 4204 | 0 | Rice-field soil | GCA_001613545.1 | No |