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. 2019 Oct 12;20(20):5060. doi: 10.3390/ijms20205060

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© 2019 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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Consensus sequences of the TIFY motif and the Jas domain for different lineages in the plant kingdom. TIFY motif logo sequence and Jas domain showing degron, Jas motif and Nuclear Localization Signal (NLS) logo sequences. Logo sequences of the TIFY motif were obtained from 9, 1, 8, 159, 6, 287 and 515 sequences for moss, liverwort, lycophyte, gymnosperms, Amborella trichopoda, monocots and dicots, respectively. Logo sequences of the degron were obtained from 9, 1, 8, 167, 6, 287 and 516 sequences for moss, liverwort, lycophyte, gymnosperms, A. trichopoda, monocots and dicots, respectively. Logo sequences of the Jas motif were obtained from 9, 1, 8, 195, 6, 303 and 543 sequences for moss, liverwort, lycophyte, gymnosperms, A. trichopoda, monocots and dicots, respectively. Logo sequences of NLS were obtained from 7, 1, 2, 168, 6, 278 and 510 sequences for moss, liverwort, lycophyte, gymnosperms, A. trichopoda, monocots and dicots, respectively. JAZ proteins lacking the TIFY motif were not included in the analysis. For more details, see the Materials and Methods section.