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. 2019 Oct 21;20(20):5209. doi: 10.3390/ijms20205209

Table 4.

Interactions between BVM, 14a, and HIV-1 CA CTD-SP1 protein.

Protein Ligand Interaction
Name Chain: Residue Name Residue Type Distance [Å]
CTD-SP1 (5I4T) I:Lys227 BVM carboxylate salt bridge 1.90
J:Lys227 carboxylate attractive charge 3.67
I:Pro224 C-21 of betulin carbon–hydrogen bond 2.90
J:Lys227 carboxylate alkyl–alkyl 2.11
L:Gly223 carboxylate alkyl–alkyl 2.30
G:Lys158 C-21 of betulin alkyl–alkyl 4.69
L:Pro224 C-21 of betulin alkyl–alkyl 5.41
L:Lys158 C-25 of betulin alkyl–alkyl 5.28
K:Lys158 C-29 of betulin alkyl–alkyl 3.67
K:Lys158 C-30 of betulin alkyl–alkyl 3.89
G:Lys158 C-21 of betulin alkyl–alkyl 4.55
J:Lys158 C-5′ of BVM alkyl–alkyl 3.71
J:Lys158 C-6′ of BVM alkyl–alkyl 4.76
I:Lys227 14a carboxylate salt bridge 1.99
G:Lys158 carboxylate carbon–hydrogen bond 2.98
K:Lys158 carboxylate carbon–hydrogen bond 5.18
J:Lys227 phosphonate conventional hydrogen bond 2.23
L:Lys158 phosphonate conventional hydrogen bond 1.97
J:Lys227 ethyl carbon–hydrogen bond 2.40
L:Lys158 phosphonate carbon–hydrogen bond 2.19
J:Gly222 ethyl carbon–hydrogen bond 3.59
I:Lys158 C-25 of betulin alkyl–alkyl 5.23
K:Lys158 C-24 of betulin alkyl–alkyl 4.94
I:Lys158 C-7 of betulin alkyl–alkyl 4.38
H:Lys158 ethyl alkyl–alkyl 5.23
J:Pro224 ethyl alkyl–alkyl 4.08
H:Lys158 ethyl alkyl–alkyl 3.69