Table 2.
This table shows the 20 genes that are in the set of conserved cisplatin-responsive gene set, and how those genes are up- and down-expressed in each of four Lehmann-identified TNBC subtypes. ‘UP’ indicates the gene is over-expressed and ‘DOWN’ indicates the gene is under-expressed. The ‘LAR’ or ‘M’ column indicates that the gene is differentially expressed in one of the two cisplatin-resistant subtypes compared with the BL1 or BL2 sensitive subtypes. The ‘Cell Death’ column indicates if the gene has been associated with a Gene Ontology term describing an aspect of cell death
Gene Symbol | Gene Name | BL1 | BL2 | M | LAR | Resistant | Death |
---|---|---|---|---|---|---|---|
ABCC2 | ATP binding cassette subfamily C member 2 | UP | * | ||||
ADM | adrenomedullin | UP | UP | * | |||
AKT1 | AKT serine/threonine kinase 1 | UP | * | * | |||
BCL2 | BCL2 apoptosis regulator | DOWN | * | ||||
BCL2L1 | BCL2 like 1 | UP | * | * | |||
CASP8 | caspase 8 | DOWN | UP | * | * | ||
CAV1 | caveolin 1 | UP | * | ||||
CLU | clusterin | DOWN | UP | * | * | ||
FAS | Fas cell surface death receptor | DOWN | * | * | |||
FOS | Fos proto-oncogene, AP-1 transcription factor subunit | DOWN | * | ||||
GSR | glutathione-disulfide reductase | UP | * | ||||
GJA1 | gap junction protein alpha 1 | DOWN | UP | UP | * | ||
HSPB1 | heat shock protein family B (small) member 1 | UP | UP | * | |||
MSH2 | mutS homolog 2 | UP | DOWN | * | * | ||
NOX4 | NADPH oxidase 4 | DOWN | UP | * | * | ||
NQO1 | NAD(P)H quinone dehydrogenase 1 | UP | * | * | |||
PTK2 | protein tyrosine kinase 2 | UP | * | ||||
TUBA1A | tubulin alpha 1a | UP | DOWN | * | |||
VCAM1 | vascular cell adhesion molecule 1 | DOWN | * | ||||
VIM | vimentin | UP | DOWN | * |