TABLE 1.
Straina | Insert position (TA location)b | Locus | Gene | Protein | % predicted translated |
---|---|---|---|---|---|
UWCM001 | 242824>25 | TC0206 | Hypothetical protein | 86 | |
UWCM002 | 785559<60 | TC0657 | pgi | Glucose-6-phosphate isomerase | 30 |
UWCM003 | 472705>06 | TC0411 | Inc (predicted) | 99 | |
UWCM004a | 35408>09 | TC0031 | gyrA2 | DNA topoisomerase IV subunit A | 67 |
UWCM004b | 730561>62 | TC0610 | uvrA | Excinuclease ABC subunit A | 11 |
UWCM005 | 1018583 | TC0878 | Hypothetical protein | 11 | |
UWCM006 | 818430<31 | IGR | |||
UWCM007a | 301598>99 | TC0257 | glgB | 14-Alpha-glucan-branching protein | 86 |
UWCM007b | 498439>40 | TC0431 | macP | MAC/perforin family protein | 8 |
UWCM008 | 303619>20 | TC0259 | Hypothetical protein | 90 | |
UWCM009 | 220664>65 | TC0189 | Hypothetical protein | 77 | |
UWCM010 | 363126>27 | TC0305 | Hypothetical protein | 80 | |
UWCM011 | 687198<99 | TC0575 | pknD | Serine/threonine protein kinase | 7 |
UWCM012 | 827362<63 | TC0693 | pmpA | Outer membrane protein PmpA | 77 |
UWCM013 | 413657<58 | TC0350 | folD | Bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | 25 |
UWCM014a | 232911>12 | TC0197 | pmpD | Outer membrane protein PmpD | 67 |
UWCM014b | 395719<20 | TC0333 | gnd | 6-Phosphogluconate dehydrogenase | 98 |
UWCM015 | 503579<80 | TC0435 | Phospholipase | 66 | |
UWCM016 | 505694>95 | IGR | |||
UWCM017 | 887618<19 | TC0473 | Acetyltransferase | 66 | |
UWCM018 | 1065355<56 | IGR | |||
UWCM019 | 319531<32 | TC0267 | pmpI | Outer membrane protein PmpI | 70 |
UWCM020 | 94501>02 | IGR | |||
UWCM021 | 26638<39 | IGR | |||
UWCM022 | 361528< | TC0303 | Hypothetical protein | 0 | |
363601c | TC0306 | Hypothetical protein | 70d | ||
UWCM023a | 524741>42 | TC0438 | Cytotoxin/adherence factor | 86 | |
UWCM023b | 1001585<86 | IGR | |||
UWCM024 | 429854<55 | TC0368 | ribF | Bifunctional riboflavin kinase/FMN adenyltransferase | 2 |
UWCM024 | TC0369 | truB | tRNA pseudouridine synthase B | 98 | |
UWCM025 | 726016>17 | TC0606 | Exodeoxyribonuclease 7 small subunit | 32 | |
UWCM026 | 251258<59 | TC0212 | rmuC | DNA recombination protein RmuC homolog | 60 |
UWCM027 | 301598>99 | TC0257 | glgB | 1,4-Alpha-glucan branching protein | 86 |
UWCM028 | 1006942<42 | IGR | |||
UWCM029 | 4770>71e | CDS6 | pNigg CDS6 | 64 | |
UWCM030 | 641212<13 | TC0530 | Protein phosphatase | 72 | |
UWCM031 | 358972<73 | TC0302 | recD | ATPase AAA | 86 |
UWCM032 | 959708<09 | TC0828 | mip | Peptidyl-prolyl cis-trans isomerase | 15 |
UWCM033 | 87859<60 | TC0075 | Hypothetical protein | 22 |
a and b indicate two separate transposon insertions.
Genome location on C. muridarum chromosome (NC_002620); > and < indicate the orientation of the gfp-cat transposon in the genome.
Insert occurred with a 2,072-bp deletion beginning at 361529; genes TC0304 and TC0305 were deleted.
Truncation due to transposon insertion occurred at the 3′ end of TC0306.
Genome location on C. muridarum plasmid pMoPn (NC_002182).