Table 1.

Pairwise comparison (percentage overlap) of hubs, MDS and MCDS for the LIHC dataset

Methods	edgeR	voom	VST
DESeq	82,84,77	88,81,74	82,81,71
edgeR	-	80,82,78	70,75,68
voom	-	-	87,92,95

Pairwise comparison of hubs(left), MDS(middle) and MCDS(right numbers) for the networks constructed from the set of DE genes detected by DESeq, edgeR, voom and VST methods in the LIHC dataset