Table 2.
Methods | edgeR | voom | VST |
DESeq | 96,83,81 | 91,80,79 | 96,83,80 |
edgeR | - | 86,83,83 | 70,72,75 |
voom | - | - | 83,85,88 |
Pairwise comparison of hubs(left), MDS(middle) and MCDS(right numbers) for the networks constructed from the set of DE genes detected by DESeq, edgeR, voom and VST methods for the BRCA dataset