Table 1. Gene expression and clean reads analyses in “Yufen I” H line feather follicles.
| Sample name | Raw reads/Mb | Clean reads/Mb | Clean reads Q30/% |
Mapping rate/% |
Uniquely mapped rate/% | Total gene number | Total transcript number |
|---|---|---|---|---|---|---|---|
| A1 | 66.38 | 44.06 | 94.88 | 74.23 | 67.56 | 19054 | 36729 |
| A2 | 69.62 | 45.05 | 94.74 | 71.66 | 62.18 | 18640 | 33464 |
| A3 | 72.86 | 44.23 | 95.00 | 70.56 | 63.28 | 18669 | 33808 |
| B1 | 66.38 | 44.90 | 94.74 | 71.65 | 65.75 | 18567 | 33874 |
| B2 | 69.62 | 44.18 | 94.84 | 67.83 | 62.22 | 18565 | 34097 |
| B3 | 66.38 | 44.62 | 94.80 | 71.97 | 64.73 | 18793 | 33858 |