Table 1.
Statistic of sequencing and de novo assembling of transcriptome in F. tataricum.
| Sample | Total Number | Total Length (nt) | Mean Length (nt) | N50 | Total Consensus Sequences | Distinct Clusters | Distinct Singletons | |
|---|---|---|---|---|---|---|---|---|
| Contigs | C1 | 97,017 | 48,783,474 | 503 | 1133 | - | - | - |
| C2 | 103,961 | 51,398,910 | 494 | 1104 | - | - | - | |
| C3 | 98,588 | 49,113,021 | 498 | 1130 | - | - | - | |
| T1 | 117,182 | 52,926,262 | 452 | 1007 | - | - | - | |
| T2 | 104,429 | 49,990,958 | 479 | 1081 | - | - | - | |
| T3 | 118,868 | 53,985,959 | 454 | 1001 | - | - | - | |
| Unigenes | C1 | 58,789 | 60,570,998 | 1030 | 1680 | 58,789 | 21,105 | 37,684 |
| C2 | 62,559 | 64,289,688 | 1028 | 1686 | 62,559 | 22,445 | 40,114 | |
| C3 | 58,644 | 60,081,202 | 1025 | 1668 | 58,644 | 20,637 | 38,007 | |
| T1 | 64,470 | 62,513,110 | 970 | 1639 | 64,470 | 21,291 | 43,179 | |
| T2 | 60,146 | 60,524,742 | 1006 | 1675 | 60,146 | 20,498 | 39,648 | |
| T3 | 65,749 | 63,160,040 | 961 | 1631 | 65,749 | 20,948 | 44,801 | |
| All | 94,950 | 107,581,109 | 1133 | 1900 | 94,950 | 38,242 | 56,708 |
C1-3 and T1-3 mean control (C) and salt-treated (T) samples with three repeats, respectively.