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. 2019 Nov 6;19:245. doi: 10.1186/s12866-019-1597-1

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Core genome SNP phylogeny and heat map of antibiotic resistance genes identified. MRSA isolates are shown in blue and MSSA isolates are in black. Green denotes the presence and red the absence of the genes listed. Ubiquitously expressed genes are not indicated (S. aureus 23S, arlR, arlS, mgrA, and tet38)