Table 2. Summary of methods used in LAMP amplicon end-point detection in previous studies.
Detection parameter | Open/ closed system |
Evaluation of results | Equipment for end-point detection | Remarks | References |
---|---|---|---|---|---|
Turbidity | Closed | Turbid—positive Clear—negative |
Turbidimeter or none | Not always easy to interpret | Khan and colleagues 2012 [56]; Mikita and colleagues 2014 [43] |
Gel-electrophoresis | Open | Ladder-like bands—positive No band—negative |
UV transilluminator | Prone to contamination | Nzelu and colleagues 2014 [27]; Gao and colleagues 2015 [73] |
Calcein | Closed | Green—positive Orange—negative |
UV lamp | Inconvenient due to dangerous UV illuminator | Gao and colleagues 2015 [73] |
SYBR Green I | Open or closed | Green—positive Orange—negative |
UV light or none | Inhibits LAMP reaction and prone to contamination when added postreaction | Verma and colleagues 2013, 2017 [44, 57]; Ghodrati and colleagues 2017 [78]; Dixit and colleagues 2018 [58] |
FDR (Eiken) | Closed | Fluorescent green—positive Pale brown—negative |
UV light | Expensive | Adams and colleagues 2010 [37]; Mikita and colleagues 2014 [43] |
Hydroxy naphthol blue | Closed | Sky blue—positive Violet—negative |
Light box (optional) or none | Ambiguous to discern, requires operator to distinguish results | Goto and colleagues 2009 [82] |
Malachite green | Closed | Light blue—positive Colorless—negative |
None | Easy to discern results by the naked eye; stable and can be kept for record purposes | Nzelu and colleagues 2014 [27], 2016 [9]; Sriworarat and colleagues 2015 [41]; León and colleagues 2018 [80] |
FDR, Fluorescent detection reagent; LAMP, loop-mediated isothermal amplification: UV, ultra-violet