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. 2019 Nov 7;14(11):e0224569. doi: 10.1371/journal.pone.0224569

Fig 2. Analysis of nucleotide sequence variation and diversity in RBSDV-S5.

Fig 2

(a): Obtaining of the open reading frames. (b): Analysis of nucleotide variation type in S5. (c): Analysis of rate of mutated bases between OR/ORF5-1 and OR/ORF5-2. (d): Venn analysis of singleton variable sites and parsimony-informative sites among populations. (e): Sliding-window analysis of nucleotide sequence diversity in complete S5 sequences calculated using a 100-bp window and 50-bp steps in subpopulation T127. (f): Sliding-window analysis of nucleotide sequence diversity in S5 from nt 2350 to nt 2950 calculated using a 20-bp window and 10-bp steps in subpopulation T127. (g): Significant difference analysis of nucleic acid diversity of S5 with 127 isolations based on ORF5-1, ORF5-2, and OR. (h): Significance analysis of nucleic acid diversity among populations.