(
A) The insertion (including the plasmid backbone) is about 6.8 kb in length and the bhsp68 promoter is located approximately ~700 bp upstream of the transcription start site. The EGFP transcription unit is oriented in the opposite direction to
Tc-foxQ2. (
B) The upper row is the predicted sequence of a perfect insertion without indels where gray indicates the left and right extremes of the 6.8 kb insert and the gRNA target sequence is underlined. The lower row is the actual sequencing results of this line. The insertion occurred at the predicted site (3 bp upstream of the PAM, AGG shown in red) and small insertions occurred at both integration sites (green). The purple bases represent the gRNA1 target sequence (targeting the genomic DNA) and the brown bases represent the gRNA-eb target sequence (targeting the plasmid for linearization). The genomic region and sequence of
Tc-foxQ2 (
Tc004761) are viewed by the iBeetle genome browser (
http://ibeetle-base.uni-goettingen.de/gb2/gbrowse/tribolium/). gRNA1 target sequence:
5’ GGGCGTTACTGTCACCCTCCAGG 3’gRNA-eb target sequence:
5’ CCAGGAGGCGGGCTGCCCGGTTC 3’.