Table 2.

Summary of Disease Similarity Methods

Author(s)	Molecule Based	Phenotype Based	Hierarchy Based	Vocabulary	PMID (or Reference Number)	Year
Freudenberg and Propping21		√		OMIM	12385992	2002
van Driel et al.67		√		OMIM	16493445	2006
Köhler et al.68		√		OMIM	19800049	2009
Zhang et al.69		√		OMIM	20659468	2010
Zhou et al.72		√		MeSH	24967666	2014
Chen et al.73		√		UMLS	25277758	2015
Hoehndorf et al.119		√		DO	26051359	2015
Deng et al.120		√		OMIM	25664462	2015
Mabotuwana et al.92		√		SNOMED CT	23850839	2013
Mathur et al.99	√			DO	21347137	2010
Suthram et al.78	√			UMLS	20140234	2010
Gottlieb et al.8	√			UMLS	21654673	2011
Hamaneh and Yu82	√			OMIM/MeSH	25360770	2014
Kim et al.83	√			PharmGKB	26212477	2015
Wang et al.35			√	DO/MeSH	17344234	2007
Resnik27	√		√	DO	27	1995
Lin126	√		√	DO	28	1998
Schlicker et al.98	√		√		16776819	2006
Mathur et al.	√		√	DO	22166490	2012
Cheng et al.91	√		√	DO	24932637	2014