Table 1. Detailed information for the MADS-box gene family in willow.
| Gene | Sequence ID | Class | Chr | Orthologue | Physicochemical characteristics | Introns | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| PtMADS | AtMADS | OsMADS | Length (aa) | MW (kDa) | PI | |||||
| SsMADS1 | willow_GLEAN_10012476 | MIKCc | chr01 | 101 | 20 | 50 | 209 | 24.00 | 8.53 | 6 |
| SsMADS2 | willow_GLEAN_10012473 | MIKCc | chr01 | 97 | 6 | 6,17 | 232 | 27.06 | 9.1 | 7 |
| SsMADS3 | willow_GLEAN_10014137 | Mγ | chr01 | 46 | – | – | 401 | 43.52 | 7.05 | 0 |
| SsMADS4 | willow_GLEAN_10007397 | Mα | chr01 | 47,48 | – | – | 530 | 60.23 | 6.67 | 8 |
| SsMADS5 | willow_GLEAN_10007399 | Mα | chr01 | 47,48 | – | – | 212 | 24.34 | 6.22 | 0 |
| SsMADS6 | willow_GLEAN_10011253 | Mβ | chr01 | 90 | – | – | 595 | 67.62 | 9.16 | 7 |
| SsMADS7 | willow_GLEAN_10022499 | MIKCc | chr02 | 69 | APETALA3 | 16 | 220 | 25.64 | 9.15 | 6 |
| SsMADS8 | willow_GLEAN_10020801 | MIKCc | chr02 | 64 | PISTILLATA | 16 | 829 | 92.12 | 6.57 | 7 |
| SsMADS9 | willow_GLEAN_10020993 | MIKCc | chr02 | 68 | 24 | 47 | 222 | 24.91 | 8.33 | 6 |
| SsMADS10 | willow_GLEAN_10021024 | MIKCc | chr02 | 66 | 16 | 57 | 217 | 24.78 | 9.59 | 5 |
| SsMADS11 | willow_GLEAN_10011768 | MIKCc | chr02 | 71 | 14 | 50 | 165 | 18.94 | 9.35 | 4 |
| SsMADS12 | willow_GLEAN_10020216 | Mβ | chr02 | 67,102 | – | – | 405 | 45.69 | 7.57 | 0 |
| SsMADS13 | willow_GLEAN_10025520 | MIKCc | chr03 | 94 | 14 | 50 | 287 | 32.58 | 10.07 | 5 |
| SsMADS14 | willow_GLEAN_10008017 | MIKCc | chr03 | 95 | 2,9 | 7∕45, 8∕24 | 245 | 27.96 | 8.58 | 7 |
| SsMADS15 | willow_GLEAN_10008015 | MIKCc | chr03 | 35,26 | – | 6,17 | 263 | 29.40 | 9.31 | 4 |
| SsMADS16 | willow_GLEAN_10008014 | MIKCc | chr03 | 35,26 | – | 6,17 | 218 | 24.65 | 7.83 | 6 |
| SsMADS17 | willow_GLEAN_10017246 | MIKCc | chr04 | 25 | AGAMOUS | 58 | 350 | 39.19 | 9.3 | 8 |
| SsMADS18 | willow_GLEAN_10011967 | Mα | chr04 | 21 | – | – | 194 | 21.74 | 9.08 | 0 |
| SsMADS19 | willow_GLEAN_10011966 | Mα | chr04 | 27 | 29 | – | 178 | 20.10 | 9.96 | 0 |
| SsMADS20 | willow_GLEAN_10009082 | MIKCc | chr05 | 53 | – | 29 | 219 | 25.34 | 8.54 | 4 |
| SsMADS21 | willow_GLEAN_10027002 | MIKCc | chr06 | 43 | 15 | 57 | 250 | 28.08 | 8.65 | 7 |
| SsMADS22 | willow_GLEAN_10025994 | Mγ | chr06 | 44 | 48 | – | 469 | 51.05 | 5.84 | 0 |
| SsMADS23 | willow_GLEAN_10026418 | Mα | chr06 | 12,42 | – | – | 374 | 40.67 | 4.44 | 0 |
| SsMADS24 | willow_GLEAN_10012682 | MIKCc | chr07 | 49 | APETALA3 | 16 | 229 | 26.62 | 8.84 | 6 |
| SsMADS25 | willow_GLEAN_10007501 | MIKCc | chr07 | 53 | 90 | 29 | 233 | 27.19 | 7.71 | 5 |
| SsMADS26 | willow_GLEAN_10007031 | MIKC* | chr07 | 52 | 104 | 63 | 364 | 41.19 | 5.61 | 10 |
| SsMADS27 | willow_GLEAN_10014009 | Mα | chr07 | 6 | 43 | – | 254 | 28.19 | 9.17 | 1 |
| SsMADS28 | willow_GLEAN_10014039 | MIKC* | chr07 | 51 | – | – | 169 | 19.01 | 9.3 | 4 |
| SsMADS29 | willow_GLEAN_10024615 | Mβ | chr08 | 84 | – | – | 202 | 22.90 | 6 | 0 |
| SsMADS30 | willow_GLEAN_10024753 | Mα | chr08 | 17 | – | – | 197 | 22.70 | 9.36 | 0 |
| SsMADS31 | willow_GLEAN_10025082 | MIKC* | chr08 | 85 | 30 | 68 | 357 | 39.79 | 6.95 | 9 |
| SsMADS32 | willow_GLEAN_10025158 | MIKCc | chr08 | 87,95 | 2,9 | 7∕45, 8∕24 | 241 | 27.62 | 5.65 | 7 |
| SsMADS33 | willow_GLEAN_10025159 | MIKCc | chr08 | 86 | 7 | 15 | 212 | 24.53 | 8.48 | 5 |
| SsMADS34 | willow_GLEAN_10008129 | MIKC* | chr09 | 57 | – | – | 80 | 9.23 | 10.33 | 1 |
| SsMADS35 | willow_GLEAN_10022978 | Mα | chr09 | 19 | – | – | 205 | 23.07 | 5.29 | 0 |
| SsMADS36 | willow_GLEAN_10023049 | MIKCc | chr09 | 15 | 15 | 29 | 259 | 29.39 | 8.81 | 7 |
| SsMADS37 | willow_GLEAN_10024397 | MIKCc | chr09 | 89,66 | 44 | 57,61 | 263 | 30.14 | 9.39 | 6 |
| SsMADS38 | willow_GLEAN_10024365 | Mα | chr09 | 18 | 43 | – | 416 | 46.75 | 9.62 | 2 |
| SsMADS39 | willow_GLEAN_10021705 | Mα | chr10 | 29,7 | – | – | 203 | 23.09 | 5.25 | 0 |
| SsMADS40 | willow_GLEAN_10013611 | MIKC* | chr10 | 85 | 30 | 68 | 894 | 98.51 | 6.62 | 13 |
| SsMADS41 | willow_GLEAN_10019310 | Mβ | chr10 | 2 | – | – | 342 | 37.50 | 8.32 | 1 |
| SsMADS42 | willow_GLEAN_10004380 | Mβ | chr10 | 1 | – | – | 201 | 22.46 | 5.02 | 0 |
| SsMADS43 | willow_GLEAN_10005930 | MIKCc | chr11 | 41 | AGAMOUS | 3 | 227 | 25.81 | 9.62 | 5 |
| SsMADS44 | willow_GLEAN_10013792 | MIKCc | chr12 | 103 | – | 34 | 135 | 15.72 | 9.47 | 3 |
| SsMADS45 | willow_GLEAN_10006110 | MIKCc | chr13 | 103 | – | 34 | 232 | 26.73 | 8.84 | 5 |
| SsMADS46 | willow_GLEAN_10016051 | MIKCc | chr14 | 82 | 6 | 7,16 | 218 | 25.40 | 9.85 | 6 |
| SsMADS47 | willow_GLEAN_10016052 | MIKCc | chr14 | 83 | 20 | 50 | 218 | 25.38 | 9.55 | 6 |
| SsMADS48 | willow_GLEAN_10004716 | Mβ | chr15 | 60 | – | – | 220 | 25.26 | 6.85 | 0 |
| SsMADS49 | willow_GLEAN_10009701 | MIKCc | chr15 | – | 20 | 50 | 266 | 31.05 | 8.98 | 7 |
| SsMADS50 | willow_GLEAN_10023443 | MIKCc | chr16 | 95 | 2,9 | 7∕45, 8∕24 | 267 | 30.54 | 6.26 | 8 |
| SsMADS51 | willow_GLEAN_10003749 | MIKCc | chr16 | 94 | 14 | 50 | 255 | 28.99 | 9.34 | 7 |
| SsMADS52 | willow_GLEAN_10002958 | Mβ | chr16 | 20 | – | – | 265 | 30.53 | 5.37 | 0 |
| SsMADS53 | willow_GLEAN_10003926 | MIKCc | chr17 | 23 | 29 | 7∕45, 8∕24 | 245 | 28.17 | 8.27 | 7 |
| SsMADS54 | willow_GLEAN_10003927 | MIKCc | chr17 | 14,26 | 8 | 14,15 | 238 | 27.54 | 9.18 | 6 |
| SsMADS55 | willow_GLEAN_10006611 | Mα | chr18 | – | – | – | 310 | 33.64 | 4.74 | 0 |
| SsMADS56 | willow_GLEAN_10013302 | MIKCc | chr19 | 72,31 | 12 | 26 | 321 | 36.31 | 8.47 | 4 |
| SsMADS57 | willow_GLEAN_10001835 | MIKC* | N/A | 45 | – | – | 82 | 9.51 | 9.9 | 1 |
| SsMADS58 | willow_GLEAN_10001302 | MIKCc | N/A | 31 | 12 | 26 | 156 | 17.88 | 9.1 | 3 |
| SsMADS59 | willow_GLEAN_10001292 | Mγ | N/A | 34 | 80 | – | 235 | 26.81 | 9.27 | 0 |
| SsMADS60 | willow_GLEAN_10000968 | Mγ | N/A | – | – | – | 158 | 18.14 | 5.99 | 0 |
Notes.
- Chr
- chromosome numbers
- N/A
- not available
- –
- not detected