Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2019 Nov 1;10:2476. doi: 10.3389/fmicb.2019.02476

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2019 Ettinger and Eisen.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

PMC Copyright notice

Mean relative abundance of ASVs across leaf length. The mean relative abundance of ASVs with a mean of greater than two percent are shown across leaf segments, 0–5 inches (n = 10), 5–10 inches (n = 10), 10–15 inches (n = 10), 15–20 inches (n = 10) and 20–25 inches (n = 10), with the standard error of the mean represented by error bars and bars colored by taxonomic phylum. The dataset was first subset to a depth of 5,000 sequences per sample and then converted into relative abundance values. ASVs were grouped into complexes if ASVs shared greater than 99% sequence identity. Taxonomy was inferred for ITS2 ASVs using the RDP Naive Bayesian Classifier algorithm with a modified UNITE (v. 8.0) database (Wang et al., 2007; UNITE Community, 2019).