Table 3.
Primers and their sequences used in this study.
Gene | Antimicrobial Agent | Primer | Primer Sequence (5′–3′) | Reference |
---|---|---|---|---|
mecA | Methicillin/Oxacillin | mecA-F | TCC AGA TTA CAA CTT CAC CAG G | [21] |
mecA-R | CCA CTT CAT ATC TTG TAA CG | |||
erm(A) | Erythromycin | ermA-F | TAT CTT ATC GTT GAG AAG GGA TT | |
ermA-R | CTA CAC TTG GCT TAG GAT GAA A | |||
erm(B) | ermB-F | CTA TCT GAT TGT TGA AGA AGG ATT | ||
ermB-R | GTT TAC TCT TGG TTT AGG ATG AAA | |||
erm(C) | ermC-F | CTT GTT GAT CAC GAT AAT TTC C | ||
ermC-R | ATC TTT TAG CAA ACC CGT ATT C | |||
blaZ | Penicillin | blaZ-F | ACT TCA ACA CCT GCT GCT TTC | |
blaZ-R | TGA CCA CTT TTA TCA GCA ACC | |||
aac-aphD | Gentamicin, amikacin | aac-aphD-F | TAA TCC AAG AGC AAT AAG GGC | |
aac-aphD-R | GCC ACA CTA TCA TAA CCA CTA | |||
vanA | Vancomycin | vanA.F | GCT GTG AGG TCG GTT GTG | [22] |
vanA.R | GCT CGA CTT CCT GAT GAA TAC G | |||
optrA | Linezolid, chloramphenicol | optrA-F | AGG TGG TCA GCG AAC TAA | [23] |
optrA-R | ATC AAC TGT TCC CAT TCA | |||
valS | Linezolid | valS-F | GTA ACG ATC ATC ATT TGG G | This study |
valS-R | CTT TAT TAG AGC TCA ATG GGC | |||
cfr | Oxazolidinones | Cfr-F | TGA AGT ATA AAG CAG GTT GGG AGT CA | [23] |
Cfr-R | ACC ATA TAA TTG ACC ACA AGC AGC |