Table 2.
Genes present in A. humulifolia and A. japonica chloroplast genomes.
| Category | Gene Name |
|---|---|
| Photosystem I | psaA, psaB, psaC, psaI, psaJ |
| Photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ |
| Cytochrome b/f complex | petA, petBb, petDb, petG, petL, petN |
| ATP synthase | atpA, atpB, atpE, atpFb, atpH, atpI |
| NADH dehydrogenase | ndhAb, ndhBa,b, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK |
| RNA polymerase | rpoA, rpoB, rpoC1b, rpoC2 |
| Large subunit ribosomal proteins | rpl2a, rpl14, rpl16b, rpl20, rpl22, rpl23 a, rpl32, rpl33, rpl36 |
| Small subunit ribosomal proteins | rps2, rps3, rps4, rps7a, rps8, rps11, rps12a,c, rps14, rps15, rps16b, rps18, rps19 |
| Ribosomal RNA genes | rrn4.5a, rrn5a, rrn16a, rrn23a |
| Transfer RNA genes | trnA-UGCa,b, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC, trnG-UCCb, trnH-GUG, trnI-CAUa, trnI-GAUa,b, trnK-UUUb, trnL-CAAa, trnL-UAAb, trnL-UAG, trnM-CAU, trnN-GUUa, trnP-UGG, trnQ-UUG, trnR-ACGa, trnR-UCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GACa, trnV-GAU, trnV-UACb, trnW-CCA, trnY-GUA |
| Fatty acid synthesis | accD |
| Carbon metabolism | cemA |
| Cytochrome c synthesis | ccsA |
| Proteolysis | clpPc |
| Translation initiation factor | infA |
| RNA processing | matK |
| Rubisco | rbcL |
| Proteins of unknown function | ycf1a, ycf2a, ycf3c, ycf4, ycf15 a |
a—Two gene copies in IRs; b—Genes with one intron; c—Genes with two introns.