Table 3.
Bound Nucleotide/Substrate |
Subdomain Conformation | Overall Subdomain Dynamics | ||||||
---|---|---|---|---|---|---|---|---|
NBD | SBD | Nucleotide binding cleft | Linker binding cleft | Linker | SBD | Lid | NBD | SBD |
ATP | - | closed | open | docked | docked | released | rigid | flexible(a) |
ADP | - | open | closed | mobile | undocked | docked | flexible | rigid(b) |
- | peptide | open | closed | mobile | undocked | docked | flexible | rigid(c) |
ADP | peptide | open | closed | mobile | undocked | docked | flexible | flexible(d) |
ATP | peptide | closed | open | docked | docked | released | rigid | flexible(e) |
- | - | open | closed | mobile | undocked | released | flexible | flexible(f) |