Table 6.
Detailed information on bacteriophages.
| Gene Group | vB_SauM-A | vB_SauM-C | vB_SauM-D |
|---|---|---|---|
| DNA metabolisms | nucleotide kinase (orf613), NTP pyrophosphohydrolase (orf612), nucleoside 2-deoxyribosyltransferase (orf602), RNA ligase (orf601), ribonuclease H (orf559), HNH endonuclease (orf587, 580), intron-encoded nuclease (orf1593), endonuclease (orf201, 264), homing endonuclease (orf206), ribose-phosphate pyrophosphokinase (orf280) | HNH endonuclease (orf312,319, 392, 688), ribonuclease H (orf2411), NTP pyrophosphohydrolase (orf343) nucleotide kinase (orf344), ribose-phosphate pyrophosphokinase (orf187), intron-encoded nuclease (orf216), | ribonuclease H (orf594), HNH endonuclease (orf580, orf587), RNA ligase (orf601), NTP pyrophosphohydrolase (orf612), ribonuclease H (orf453), intron-encoded nuclease (orf592), |
| DNA replication | DNA helicase (orf177, 180), recombination-related endonuclease (orf181, 184), anti-sigma factor (orf186), DNA primase (orf187), resolvase (orf190), ribonucleotide reductase stimulatory protein (orf191), ribonucleotide reductase large subunit (orf193), ribonucleotide reductase small subunit (orf195), DNA polymerase I (orf208), recombinase (orf218), sigma factor (orf221), DNA repair exonuclease (orf230), sliding clamp inhibitor (orf252), nucleotidyl transferase (orf642), terminase large subunit (orf101) | nucleotidyl transferase (orf373), recombinase (orf125), endonuclease (orf669), DNA polymerase I (orf107), ribonucleotide reductase large subunit (orf100), ribonucleotide reductase small subunit (orf638), resolvase (orf97), DNA primase (orf94), anti-sigma factor (orf93), recombination-related endonuclease (orf91, 88), helicase (orf87, 84), terminase large subunit (orf8) | DNA polymerase I (orf200), anti-sigma factor (orf186), recombination-related endonuclease (orf181), sigma factor (orf221), DNA helicase (orf177, 180), DNA primase (orf187), DNA repair exonuclease (orf230), ribonucleotide reductase small subunit (orf227), terminase large subunit (orf101), ribonucleotide reductase large subunit (orf193), recombinase (orf218) |
| Head | portal protein (orf110), prohead protease (orf112), major capsid protein (orf115) | major capsid protein (orf22), prohead protease (orf19), portal protein (orf17), putative virion protein (orf49) | portal protein (orf110), major capsid protein (orf115), prohead protease (orf112) |
| neck protein | neck protein (orf120, 122) | putative neck protein (orf29, 27) | neck protein (orf120, 122) |
| Tail | major tail protein (orf38), tail sheath protein (orf127), tail tube protein (orf129), tail assembly chaperone(orf137), tape-measure protein (orf140), tail murein hydrolase (orf145), cysteine protease (orf147), tail protein (orf226) | major tail protein (orf366), tail protein (orf 133), tail central spike (orf55), tail murein hydrolase (orf52), tape measure protein (orf47), tail morphogenetic protein (orf241), tail assembly chaperone (orf44), tail tube protein (orf36), tail sheath protein (orf34), baseplate hub assembly protein (orf31) | major tail protein (orf38), tape-measure protein (orf140), tail murein hydrolase (orf145), nicotinamide phosphoribosyl transferase (orf381), tail morphogenetic protein (orf55), adsorption-associated tail protein (orf162), tail assembly chaperone (orf137), tail sheath (orf127), tail tube protein (orf129), receptor binding protein (orf174, 170), tail central spike (orf148) |
| baseplate | baseplate component (orf151, 155, 173), baseplate wedge subunit (orf154), baseplate protein (orf160), receptor binding protein (orf170), oxidoreductase (orf197) | putative baseplate component (orf80, 60, 58), receptor binding protein (orf81), receptor binding protein (orf77) baseplate protein (orf67) baseplate component (orf62), baseplate wedge subunit (orf61) | peptidoglycan binding protein (orf604), baseplate component (orf153, 155,160, 173), baseplate wedge subunit (orf154), baseplate hub assembly protein (orf124) |
| Tail fiber | tail fiber protein (orf169) | tail fiber protein (orf69), Tail fiber protein complex (orf65) | tail fiber protein (orf169) |
| Lysis | lytic transglycosylase (orf588), N-acetylmuramoyl-L-alanine amidase (orf578), holin (orf575) | holin (orf307), N-acetylmuramoyl-L-alanine amidase (orf313), lytic transglycosylase (orf320) | holin (orf575), N-acetylmuramoyl-L-alanine amidase (orf581, 578) lytic transglycosylase (orf588) |