Data	Source	Identifier
GFP score	Verma et al., 2019
Translation efficiency	Morgan et al., 2018
Translation efficiency	Li et al., 2014
Translation efficiency	Burkahardt et al., 2017
Gini index	Burkahardt et al., 2017
Protein average	PaxDb: Protein Abundance Database
Protein abundance (APEX)	Arike et al., 2012
Protein abundance (iBAQ)	Arike et al., 2012
Protein abundance (em PAI)	Arike et al., 2012
Protein abundance (APEX)	Lu et al., 2007
Protein synthesis rate	Li et al., 2014
mRNA abundance	Burkahardt et al., 2017
mRNA abundance	Blattner et al., 2003
mRNA abundance	Covert et al., 2004
mRNA abundance	Corbin et al., 2003
Ribosome profiling frozen/MgCl2	Mohammad et al., 2019	SRR7759812
Ribosome profiling filter/MgCl2	Mohammad et al., 2019	SRR7759808
Software and algorithms
Motifs finder	This paper	https://github.com/mhoyerm/Codons_finder
GFP score assigner	This paper	https://github.com/mhoyerm/Score
Genome mixer	This paper	https://github.com/mhoyerm/Mixer
Codon shuffler	This paper	https://github.com/mhoyerm/Shuffler