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. 2019 Aug 30;16(12):1749–1763. doi: 10.1080/15476286.2019.1657370

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© 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way.

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Figure 1. — Organization of mini Ty1 RNA and Ty1 Gag. (a) Mini Ty1 RNA (+1–560) contains the primer binding site (PBS), three short boxes (Box 0, Box 1, Box 2.1; blue) that anneal with cellular tRNA_i^Met, and the palindromic sequences PAL1, PAL2, PAL3 (orange). The strands forming the stems of the pseudoknot (S1 and S2) are marked with green. (b). Schematic representation of Ty1 Gag: p49 (immature) and p45 (mature) with amino acid coordinates. The red boxes represent stretches of basic amino acids present in the nucleic acid chaperone region.