Table 1. Features of CIPK genes in foxtail millet.
| Name | Gene ID (Phytozome) |
Chromosomal location |
Gene length (bp) | Amino acid length (aa) |
PI | MW (kD) | Intro | CDS length (bp) |
|---|---|---|---|---|---|---|---|---|
| SiCIPK1 | Seita.1G065400 | scaffold_1:6114480-.6119211 | 4732 | 442 | 5.82 | 49.52 | 13 | 1329 |
| SiCIPK2 | Seita.1G079400 | scaffold_1:7157400–7160348 | 2949 | 463 | 9.06 | 53.14 | 1 | 1392 |
| SiCIPK3 | Seita.2G032200 | scaffold_2:2622179–2626013 | 3835 | 449 | 9.28 | 50.70 | 12 | 1350 |
| SiCIPK4 | Seita.2G206200 | scaffold_2:30757672–30759715 | 2044 | 473 | 8.81 | 51.37 | 1 | 1422 |
| SiCIPK5 | Seita.2G405500 | scaffold_2:46639620–46644650 | 5031 | 444 | 8.56 | 49.91 | 12 | 1335 |
| SiCIPK6 | Seita.2G431900 | scaffold_2:48228937–48232337 | 3401 | 432 | 7.68 | 46.74 | 1 | 1299 |
| SiCIPK7 | Seita.2G432000 | scaffold_2:48253461–48256377 | 2917 | 450 | 9.28 | 51.09 | 1 | 1353 |
| SiCIPK8 | Seita.2G439100 | scaffold_2:48819266–48823750 | 4485 | 447 | 7.53 | 50.59 | 14 | 1344 |
| SiCIPK9 | Seita.3G053800 | scaffold_3:3408823–3413527 | 4705 | 472 | 6.55 | 52.40 | 11 | 1419 |
| SiCIPK10 | Seita.3G181100 | scaffold_3:13673885–13675761 | 1877 | 402 | 5.52 | 45.51 | 0 | 1209 |
| SiCIPK11 | Seita.3G205700 | scaffold_3:15929206–15930558 | 1353 | 416 | 9.60 | 47.02 | 2 | 1251 |
| SiCIPK12 | Seita.3G284500 | scaffold_3:26688377–26689696 | 1320 | 439 | 8.98 | 48.40 | 0 | 1320 |
| SiCIPK13 | Seita.3G285000 | scaffold_3:26831444–26836199 | 4756 | 459 | 9.03 | 51.87 | 1 | 1380 |
| SiCIPK14 | Seita.3G380200 | scaffold_3:48267583–48269360 | 1778 | 436 | 9.23 | 47.53 | 0 | 1311 |
| SiCIPK15 | Seita.4G175800 | scaffold_4:28216455–28217894 | 1440 | 479 | 8.78 | 52.66 | 0 | 1440 |
| SiCIPK16 | Seita.4G221700 | scaffold_4:34148605–34155126 | 6522 | 452 | 8.52 | 50.84 | 13 | 1359 |
| SiCIPK17 | Seita.5G031200 | scaffold_5:2983068–2989104 | 6037 | 463 | 6.58 | 52.02 | 12 | 1392 |
| SiCIPK18 | Seita.5G145700 | scaffold_5:12942864–12944429 | 1566 | 521 | 6.73 | 57.45 | 0 | 1566 |
| SiCIPK19 | Seita.5G145900 | scaffold_5:12948718–12950070 | 1353 | 450 | 9.23 | 51.12 | 0 | 1353 |
| SiCIPK20 | Seita.5G190200 | scaffold_5:24367119–24374943 | 7825 | 450 | 6.35 | 50.63 | 14 | 1353 |
| SiCIPK21 | Seita.5G325400 | scaffold_5:37488769–37490729 | 1961 | 476 | 9.22 | 53.08 | 1 | 1431 |
| SiCIPK22 | Seita.5G325500 | scaffold_5:37492716–37496574 | 3859 | 518 | 8.92 | 57.25 | 1 | 1557 |
| SiCIPK23 | Seita.5G364100 | scaffold_5:40228601–40231852 | 3252 | 508 | 8.73 | 57.56 | 1 | 1527 |
| SiCIPK24 | Seita.6G163200 | scaffold_6:28556400–28558663 | 2264 | 451 | 9.14 | 48.83 | 0 | 1356 |
| SiCIPK25 | Seita.7G300300 | scaffold_7:34092477–34095321 | 2845 | 444 | 9.10 | 50.76 | 1 | 1335 |
| SiCIPK26 | Seita.7G311200 | scaffold_7:34704000–34709429 | 5430 | 440 | 8.05 | 50.46 | 14 | 1323 |
| SiCIPK27 | Seita.8G003400 | scaffold_8:222430–227696 | 5267 | 440 | 7.66 | 50.35 | 14 | 1323 |
| SiCIPK28 | Seita.8G014400 | scaffold_8:841196–844251 | 3056 | 445 | 9.11 | 50.92 | 1 | 1338 |
| SiCIPK29 | Seita.8G171900 | scaffold_8:31465259–31475552 | 10294 | 981 | 5.85 | 111.88 | 20 | 2946 |
| SiCIPK30 | Seita.8G172100 | scaffold_8:31487716–31498216 | 10501 | 983 | 5.91 | 112.42 | 20 | 2952 |
| SiCIPK31 | Seita.9G162500 | scaffold_9:10895437–10897187 | 1751 | 431 | 9.03 | 46.88 | 0 | 1296 |
| SiCIPK32 | Seita.9G411700 | scaffold_9:46963528–46966563 | 3036 | 449 | 9.22 | 51.00 | 1 | 1350 |
| SiCIPK33 | Seita.9G422900 | scaffold_9:47895220–47900463 | 5244 | 449 | 8.25 | 50.74 | 14 | 1350 |
| SiCIPK34 | Seita.9G557900 | scaffold_9:57360257–57364586 | 4330 | 452 | 7.99 | 50.83 | 13 | 1359 |
| SiCIPK35 | Seita.J025400 | scaffold_47:9096–13084 | 3989 | 433 | 7.61 | 49.64 | 13 | 1302 |
Abbreviations:bp = base pair, aa = amino acids, PI = isoelectric point, MW = molecular weight, kD = kilodaltons