Table 1.
Sequencing outputs and transcriptome assembly statistics of the primary, secondary and filtered Cannbio assembly.
Assembly | Statistics |
---|---|
Primary Assembly: SOAPdenovo-Trans | |
Total number of transcripts | 500,485 |
Total base pairs (without N) | 241,253,446 bp |
N50 length | 954 bp |
Secondary Assembly: CAP3 | |
Number of transcripts | 143,671 |
Total base pairs | 104,880,973 bp |
N50 | 1071 bp |
Final Assembly: Filtered | |
Number of transcripts | 64,727 |
Total base pairs | 57,300,518 bp |
N50 | 1846 bp |