Table 1.
Assembly statistics for stitched contigs, scaffolds and pseudochromosomes
| Stitched contigs | Scaffolds | Pseudochromosomes | |
|---|---|---|---|
| N50 (bp) | 10 911 736 | 16 417 655 | 41 684 185 |
| L50 | 16 | 12 | 6 |
| NG50 (bp) | 9 203 620 | 15 388 583 | 41 327 797 |
| LG50 | 21 | 15 | 7 |
| Total (bp) | 518 799 885 | 519 432 264 | 519 435 864 |
| Contigs/scaffolds | 765 | 722 | 686 |
| Contigs/scaffolds ≥ 100 kbp | 177 | 135 | 103 |
| Contigs/scaffolds ≥ 1 Mbp | 61 | 38 | 13 |
| Contigs/scaffolds ≥ 10 Mbp | 18 | 21 | 11 |
| Longest contig/scaffold (bp) | 22 343 392 | 30 539 429 | 65 292 630 |
| % N | 0.0% | 0.523% | 0.524% |
| Mapped SNPs | 49 888 | 49 888 | 49 888 |
| GC (%) | 33.0 | 32.994 | 32.994 |
SNP, single nucleotide polymorphism.