Table 4.

SNP markers with significant effects on albumen quality by univariate genome-wide association study.

GGA	SNP	Position	$P$ value	Traits	MAF	EA/AA	Location	Candidate gene	CPV (%)
1	rs14916807	169 300 311	$\mathrm{5.14}\times {\mathrm{10}}^{-\mathrm{7}}$	AH32	0.36	A/C	intron	KPNA3	2.48
2	rs314035311	534 249	$\mathrm{7.13}\times {\mathrm{10}}^{-\mathrm{7}}$	HU44	0.065	C/T	intron	CDC25A	2.24
2	rs317157401	5 316 830	$\mathrm{2.37}\times {\mathrm{10}}^{-\mathrm{7}}$	HU44	0.344	G/C	intron	WDR48	2.29
4	rs315201454	76 457 427	$\mathrm{4.69}\times {\mathrm{10}}^{-\mathrm{7}}$	AH32	0.059	G/A	intron	NCAPG	2.00
4	rs313185009	77 654 701	$\mathrm{6.27}\times {\mathrm{10}}^{-\mathrm{7}}$	AH52	0.058	G/A	intergenic	FGFBP1	2.47
4	rs313154528	77 924 330	$\mathrm{7.29}\times {\mathrm{10}}^{-\mathrm{7}}$	AH52	0.061	G/T	intergenic	BST1	2.42
7	rs312465596	31 130 005	$\mathrm{4.36}\times {\mathrm{10}}^{-\mathrm{7}}$	AH56	0.179	C/T	intron	THSD7B	2.39

Abbreviations: GGA, Gallus gallus chromosome; EA, effect allele (minor allele); AA, alternative allele (major allele); MAF, minor allele frequency; CPV, contribution to phenotypic variance (%).