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. Author manuscript; available in PMC: 2020 Oct 31.
Published in final edited form as: J Infect Dis. 2019 Oct 31;220(Suppl 4):S165–S174. doi: 10.1093/infdis/jiz358

Table 2.

Laboratory-confirmed meningitis cases from case-based meningitis surveillance, MenAfriNet, 2015–2017

Burkina Faso Chada Malia Niger Togo Total
N (%)
Laboratory-confirmed meningitis casesb 2,224 (27) 64 (39) 118 (24) 1,701 (24) 264 (33) 4,371 (26)
N. meningitidis 671 (30) 22 (34) 32 (27) 1,494 (88) 214 (81) 2,433 (56)
  Serogroup
   A 5 (1) 0 0 0 0 5 (0.2)
   C 40 (6) 0 19 (59) 1,236 (83) 0 1,295 (53)
   W 478 (71) 2 (9) 2 (6) 109 (7) 128 (60) 719 (30)
   X 91 (14) 20 (91) 8 (25) 127 (9) 69 (32) 315 (13)
   Y 4 (1) 0 2 (6) 0 0 6 (0.2)
   NmIndc 53 (8) 0 1 (3) 22 (1) 17 (8) 93 (4)
  Reported deathsd 47 (7) NR 1 (3) 59 (6) 6 (3) 113 (6)
S. pneumoniae 1,442 (65) 33 (52) 58 (49) 177 (10) 48 (18) 1,758 (40)
  Reported deathsd 245 (17) NR 6 (10) 14 (16) 7 (22) 272 (17)
H. influenzae 111 (5) 9 (14) 28 (24) 30 (2) 2 (1) 180 (4)
  Serotype
   Serotype b 82 (74) 5 (56) 18 (64) 13 (43) 2 (100) 120 (67)
   Non-b serotypes 29 (26) 4 (44) 10 (36) 17 (57) 0 60 (33)
  Reported deathsd 12 (11) NR 1 (4) 1 (7) 0 14 (9)

Abbreviations: NmInd, Neisseria meningitidis with indeterminate serogroup; NR, not reported.

Note: Case counts stratified by country, pathogen, age group, and year are presented in Supplemental Table 2.

a

As Mali began data collection in 2015 and 2016 was the first complete year of surveillance, only 2016–2017 data are included. Similarly, only 2017 data from Chad are included.

b

Confirmed via latex agglutination, culture, or real-time polymerase chain reaction as N. meningitidis, S. pneumoniae, or H. influenzae. Percentage calculated using the number of suspected cases with a CSF specimen (n=16,885, 92%) as the denominator.

c

Of the 93 NmInd cases, 34 (37%) were determined to be NmInd via real-time polymerase chain reaction, 5 (5%) were determined to be NmInd via culture, and 54 (58%) were determined to be NmInd as they only had latex agglutination results available, which were NmW/Y, precluding identification of a specific serogroup.

d

Percentage calculated using the number of cases with a reported outcome as the denominator.