Table 3.

Non-TcI Trypanosoma cruzi Haplotypes and Their Frequency

Haplotype	n (%)	Position in reference sequences
		13	21	75	76	86	93	117
TU18, SC43, CL		G	T	C	G	G	G	G
Non–TcI-H1	33 (35.5)
Non–TcI-H2	39 (41.9)						A
Non–TcI-H1/H2	13 (13.9)						R
Non–TcI-H3	2 (2.1)			S
Non–TcI-H4	1 (1.1)			S			R
Non–TcI-H5	1 (1.1)			G	C
Non–TcI-H6	1 (1.1)					A		R
Non–TcI-H7	1 (1.1)		G				A
Non–TcI-H8	1 (1.1)		G
Non–TcI-H9	1 (1.1)	A

CL, reference TcVI; SC43, reference TcV; TU18, reference TcII.