Table 5.
Mean Relative Abundance for each of 267 bacterial species, overall and by age categories
| Rank Ordera | OTU label | Overall (N = 1219) |
50–59 (N = 239) |
60–69 (N = 554) |
≥70 (N = 426) |
|---|---|---|---|---|---|
| Relative Abundance (%) Mean (SE) |
Relative Abundance (%) Mean (SE) |
Relative Abundance (%) Mean (SE) |
Relative Abundance (%) Mean (SE) |
||
| 1 | Veillonella dispar | 8.94 (0.26) | 8.66 (0.52) | 8.52 (0.37) | 9.64 (0.48) |
| 2 | Streptococcus oralis | 7.68 (0.24) | 9.52 (0.60) | 7.95 (0.39) | 6.29 (0.31) |
| 3 | Veillonella parvula | 6.57 (0.22) | 6.14 (0.44) | 6.07 (0.30) | 7.46 (0.42) |
| 4 | Fusobacterium nucleatum_subsp._vincentii | 4.00 (0.14) | 3.82 (0.32) | 4.11 (0.21) | 3.97 (0.23) |
| 5 | Selenomonas sputigena | 2.94 (0.12) | 2.23 (0.20) | 2.66 (0.16) | 3.70 (0.25) |
| 6 | Fusobacterium sp._oral_taxon_203 | 2.35 (0.13) | 2.15 (0.28) | 2.63 (0.21) | 2.09 (0.20) |
| 7 | Prevotella oris | 1.85 (0.07) | 1.81 (0.14) | 1.89 (0.11) | 1.81 (0.10) |
| 8 | Prevotella nigrescens | 1.78 (0.07) | 1.64 (0.13) | 1.81 (0.11) | 1.81 (0.12) |
| 9 | Fusobacterium nucleatum_subsp._animalis | 1.65 (0.06) | 1.54 (0.13) | 1.63 (0.09) | 1.74 (0.09) |
| 10 | Selenomonas noxia | 1.48 (0.07) | 1.52 (0.18) | 1.45 (0.11) | 1.50 (0.11) |
| 11 | Fusobacterium nucleatum_subsp._polymorphum | 1.42 (0.04) | 1.57 (0.11) | 1.50 (0.07) | 1.24 (0.07) |
| 12 | Rothia dentocariosa | 1.41 (0.10) | 1.43 (0.17) | 1.60 (0.18) | 1.16 (0.13) |
| 13 | Streptococcus sanguinis | 1.40 (0.07) | 1.83 (0.14) | 1.40 (0.09) | 1.16 (0.13) |
| 14 | Alloprevotella tannerae | 1.39 (0.07) | 1.22 (0.16) | 1.46 (0.12) | 1.41 (0.11) |
| 15 | Haemophilus parainfluenzae | 1.21 (0.09) | 1.62 (0.24) | 1.15 (0.13) | 1.07 (0.14) |
| 16 | Corynebacterium matruchotii | 1.17 (0.05) | 1.34 (0.13) | 1.24 (0.07) | 0.99 (0.06) |
| 17 | Fretibacterium sp._oral_taxon_360 | 1.15 (0.07) | 0.89 (0.13) | 1.24 (0.11) | 1.19 (0.10) |
| 18 | Streptococcus intermedius | 1.05 (0.05) | 1.27 (0.12) | 1.13 (0.08) | 0.84 (0.05) |
| 19 | TM7_[G-1] sp._oral_taxon_349 | 1.04 (0.06) | 0.97 (0.14) | 0.97 (0.07) | 1.18 (0.14) |
| 20 | Streptococcus gordonii | 1.03 (0.05) | 0.98 (0.15) | 1.01 (0.07) | 1.09 (0.10) |
| 21 | TM7_[G-1] sp._oral_taxon_346 | 1.02 (0.05) | 1.01 (0.11) | 1.05 (0.07) | 1.00 (0.08) |
| 22 | Porphyromonas gingivalis | 0.94 (0.10) | 0.95 (0.27) | 0.74 (0.10) | 1.21 (0.19) |
| 23 | Campylobacter gracilis | 0.94 (0.02) | 0.90 (0.06) | 0.96 (0.04) | 0.95 (0.04) |
| 24 | Fusobacterium naviforme | 0.89 (0.06) | 0.91 (0.13) | 0.92 (0.10) | 0.83 (0.07) |
| 25 | Parvimonas micra | 0.88 (0.03) | 0.87 (0.07) | 0.96 (0.05) | 0.78 (0.05) |
| 26 | Neisseria sicca | 0.80 (0.07) | 0.83 (0.21) | 0.87 (0.11) | 0.69 (0.09) |
| 27 | Leptotrichia wadei | 0.79 (0.06) | 0.81 (0.15) | 0.74 (0.08) | 0.86 (0.11) |
| 28 | Selenomonas artemidis | 0.79 (0.05) | 0.87 (0.12) | 0.75 (0.07) | 0.79 (0.08) |
| 29 | Bacteroidales_[G-2] sp._oral_taxon_274 | 0.79 (0.04) | 0.64 (0.08) | 0.85 (0.07) | 0.79 (0.06) |
| 30 | Prevotella sp._oral_taxon_317 | 0.77 (0.04) | 0.67 (0.07) | 0.80 (0.05) | 0.78 (0.06) |
| 31 | Anaeroglobus geminatus | 0.67 (0.04) | 0.43 (0.08) | 0.58 (0.06) | 0.92 (0.09) |
| 32 | Capnocytophaga granulosa | 0.65 (0.03) | 0.63 (0.09) | 0.66 (0.05) | 0.64 (0.06) |
| 33 | Streptococcus salivarius | 0.64 (0.05) | 0.61 (0.09) | 0.67 (0.09) | 0.64 (0.07) |
| 34 | TM7_[G-1] sp._oral_taxon_952 | 0.64 (0.03) | 0.72 (0.08) | 0.71 (0.05) | 0.50 (0.05) |
| 35 | Prevotella denticola | 0.62 (0.05) | 0.49 (0.07) | 0.57 (0.08) | 0.76 (0.09) |
| 36 | Capnocytophaga leadbetteri | 0.61 (0.03) | 0.59 (0.07) | 0.63 (0.05) | 0.61 (0.07) |
| 37 | Gemella morbillorum | 0.61 (0.02) | 0.69 (0.07) | 0.65 (0.04) | 0.52 (0.04) |
| 38 | Veillonella atypica | 0.61 (0.05) | 0.50 (0.09) | 0.55 (0.07) | 0.75 (0.08) |
| 39 | Streptococcus mutans | 0.60 (0.05) | 0.47 (0.09) | 0.51 (0.07) | 0.80 (0.10) |
| 40 | Fretibacterium sp._oral_taxon_359 | 0.60 (0.06) | 0.77 (0.17) | 0.60 (0.09) | 0.49 (0.07) |
| 41 | Prevotella intermedia | 0.59 (0.06) | 0.62 (0.15) | 0.63 (0.09) | 0.52 (0.09) |
| 42 | Dialister invisus | 0.57 (0.02) | 0.47 (0.04) | 0.60 (0.04) | 0.60 (0.04) |
| 43 | Granulicatella adiacens | 0.56 (0.02) | 0.65 (0.05) | 0.55 (0.03) | 0.53 (0.03) |
| 44 | Porphyromonas endodontalis | 0.55 (0.04) | 0.63 (0.08) | 0.57 (0.05) | 0.49 (0.06) |
| 45 | Streptococcus cristatus | 0.55 (0.03) | 0.51 (0.07) | 0.59 (0.05) | 0.53 (0.04) |
| 46 | Capnocytophaga gingivalis | 0.55 (0.03) | 0.60 (0.07) | 0.55 (0.04) | 0.51 (0.04) |
| 47 | Prevotella pleuritidis | 0.53 (0.04) | 0.51 (0.08) | 0.56 (0.06) | 0.51 (0.06) |
| 48 | Neisseria elongata | 0.53 (0.04) | 0.66 (0.10) | 0.55 (0.05) | 0.43 (0.07) |
| 49 | Actinomyces naeslundii | 0.52 (0.02) | 0.62 (0.05) | 0.53 (0.03) | 0.46 (0.03) |
| 50 | Selenomonas sp._oral_taxon_137 | 0.51 (0.04) | 0.51 (0.09) | 0.52 (0.05) | 0.50 (0.07) |
| 51 | Tannerella forsythia | 0.49 (0.03) | 0.42 (0.06) | 0.46 (0.04) | 0.58 (0.05) |
| 52 | TM7_[G-5] sp._oral_taxon_356 | 0.47 (0.03) | 0.36 (0.07) | 0.51 (0.06) | 0.48 (0.06) |
| 53 | Campylobacter showae | 0.46 (0.02) | 0.44 (0.04) | 0.47 (0.04) | 0.46 (0.03) |
| 54 | Fretibacterium fastidiosum | 0.46 (0.03) | 0.54 (0.10) | 0.45 (0.04) | 0.42 (0.04) |
| 55 | Rothia aeria | 0.45 (0.03) | 0.45 (0.05) | 0.55 (0.06) | 0.33 (0.04) |
| 56 | Capnocytophaga sputigena | 0.45 (0.03) | 0.47 (0.05) | 0.44 (0.04) | 0.46 (0.05) |
| 57 | Gemella haemolysans | 0.44 (0.04) | 0.54 (0.08) | 0.45 (0.07) | 0.38 (0.06) |
| 58 | Leptotrichia hongkongensis | 0.43 (0.03) | 0.36 (0.04) | 0.44 (0.05) | 0.44 (0.05) |
| 59 | Neisseria flavescens | 0.42 (0.04) | 0.29 (0.06) | 0.38 (0.06) | 0.55 (0.09) |
| 60 | Neisseria oralis | 0.42 (0.05) | 0.59 (0.15) | 0.32 (0.04) | 0.45 (0.11) |
| 61 | Streptococcus anginosus | 0.42 (0.03) | 0.38 (0.05) | 0.38 (0.04) | 0.49 (0.06) |
| 62 | Aggregatibacter aphrophilus | 0.37 (0.04) | 0.33 (0.05) | 0.45 (0.07) | 0.28 (0.05) |
| 63 | Kingella oralis | 0.36 (0.02) | 0.41 (0.05) | 0.31 (0.02) | 0.39 (0.04) |
| 64 | Leptotrichia shahii | 0.36 (0.04) | 0.32 (0.07) | 0.26 (0.03) | 0.50 (0.08) |
| 65 | Leptotrichia buccalis | 0.35 (0.03) | 0.36 (0.07) | 0.40 (0.05) | 0.29 (0.05) |
| 66 | Selenomonas sp._oral_taxon_134 | 0.34 (0.02) | 0.23 (0.04) | 0.32 (0.03) | 0.43 (0.05) |
| 67 | Leptotrichia hofstadii | 0.33 (0.04) | 0.42 (0.11) | 0.34 (0.05) | 0.27 (0.05) |
| 68 | Leptotrichia sp._oral_taxon_417 | 0.32 (0.03) | 0.23 (0.04) | 0.36 (0.05) | 0.32 (0.05) |
| 69 | Cardiobacterium hominis | 0.32 (0.02) | 0.47 (0.08) | 0.33 (0.02) | 0.23 (0.02) |
| 70 | Selenomonas sp._oral_taxon_136 | 0.31 (0.02) | 0.20 (0.03) | 0.29 (0.03) | 0.40 (0.04) |
| 71 | Eikenella corrodens | 0.31 (0.01) | 0.34 (0.03) | 0.33 (0.02) | 0.25 (0.02) |
| 72 | Prevotella melaninogenica | 0.30 (0.02) | 0.25 (0.03) | 0.28 (0.03) | 0.36 (0.04) |
| 73 | Porphyromonas sp._oral_taxon_279 | 0.30 (0.02) | 0.28 (0.04) | 0.32 (0.04) | 0.30 (0.03) |
| 74 | Treponema denticola | 0.28 (0.02) | 0.26 (0.05) | 0.28 (0.03) | 0.31 (0.04) |
| 75 | Filifactor alocis | 0.28 (0.02) | 0.29 (0.05) | 0.29 (0.04) | 0.27 (0.04) |
| 76 | Actinomyces oris | 0.28 (0.02) | 0.31 (0.04) | 0.27 (0.02) | 0.27 (0.03) |
| 77 | Parvimonas sp._oral_taxon_393 | 0.28 (0.02) | 0.36 (0.05) | 0.28 (0.02) | 0.23 (0.02) |
| 78 | Veillonellaceae_[G-1] sp._oral_taxon_150 | 0.27 (0.02) | 0.22 (0.04) | 0.23 (0.02) | 0.35 (0.03) |
| 79 | Actinomyces sp._oral_taxon_169 | 0.27 (0.02) | 0.39 (0.06) | 0.26 (0.02) | 0.22 (0.03) |
| 80 | Leptotrichia sp._oral_taxon_212 | 0.27 (0.02) | 0.28 (0.03) | 0.28 (0.02) | 0.24 (0.04) |
| 81 | Rothia mucilaginosa | 0.27 (0.02) | 0.21 (0.03) | 0.28 (0.04) | 0.29 (0.03) |
| 82 | Selenomonas infelix | 0.27 (0.02) | 0.21 (0.02) | 0.27 (0.03) | 0.29 (0.03) |
| 83 | Cardiobacterium valvarum | 0.25 (0.01) | 0.31 (0.04) | 0.26 (0.02) | 0.21 (0.02) |
| 84 | Capnocytophaga sp._oral_taxon_326 | 0.25 (0.02) | 0.26 (0.04) | 0.28 (0.03) | 0.22 (0.03) |
| 85 | Prevotella sp._oral_taxon_472 | 0.25 (0.02) | 0.30 (0.05) | 0.27 (0.02) | 0.19 (0.02) |
| 86 | Treponema socranskii | 0.25 (0.01) | 0.22 (0.02) | 0.24 (0.01) | 0.27 (0.02) |
| 87 | Streptococcus constellatus | 0.25 (0.02) | 0.19 (0.03) | 0.25 (0.03) | 0.28 (0.03) |
| 88 | Veillonella rogosae | 0.24 (0.02) | 0.21 (0.04) | 0.27 (0.04) | 0.23 (0.03) |
| 89 | Fusobacterium nucleatum_subsp._nucleatum | 0.24 (0.03) | 0.21 (0.06) | 0.19 (0.04) | 0.34 (0.07) |
| 90 | Prevotella sp._oral_taxon_300 | 0.23 (0.01) | 0.24 (0.03) | 0.20 (0.01) | 0.27 (0.03) |
| 91 | Veillonellaceae_[G-1] sp._oral_taxon_155 | 0.23 (0.02) | 0.20 (0.03) | 0.20 (0.02) | 0.28 (0.03) |
| 92 | Campylobacter concisus | 0.22 (0.01) | 0.20 (0.02) | 0.23 (0.01) | 0.23 (0.02) |
| 93 | Leptotrichia sp._oral_taxon_225 | 0.22 (0.02) | 0.26 (0.06) | 0.28 (0.04) | 0.12 (0.03) |
| 94 | Selenomonas sp._oral_taxon_892 | 0.22 (0.01) | 0.24 (0.04) | 0.21 (0.02) | 0.21 (0.02) |
| 95 | Catonella morbi | 0.21 (0.01) | 0.23 (0.02) | 0.21 (0.01) | 0.19 (0.01) |
| 96 | Aggregatibacter segnis | 0.20 (0.02) | 0.21 (0.05) | 0.24 (0.04) | 0.15 (0.02) |
| 97 | Prevotella oulorum | 0.20 (0.01) | 0.21 (0.03) | 0.18 (0.01) | 0.22 (0.02) |
| 98 | Leptotrichia sp._oral_taxon_392 | 0.19 (0.01) | 0.20 (0.04) | 0.22 (0.02) | 0.16 (0.02) |
| 99 | Dialister pneumosintes | 0.19 (0.01) | 0.18 (0.03) | 0.19 (0.02) | 0.20 (0.02) |
| 100 | Veillonella denticariosi | 0.19 (0.03) | 0.17 (0.06) | 0.17 (0.04) | 0.22 (0.07) |
| 101 | Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brac | 0.19 (0.01) | 0.21 (0.02) | 0.19 (0.01) | 0.17 (0.01) |
| 102 | Megasphaera micronuciformis | 0.19 (0.02) | 0.15 (0.03) | 0.17 (0.02) | 0.23 (0.04) |
| 103 | Lautropia mirabilis | 0.18 (0.01) | 0.23 (0.03) | 0.20 (0.02) | 0.14 (0.01) |
| 104 | Streptococcus parasanguinis_II | 0.18 (0.02) | 0.15 (0.03) | 0.17 (0.02) | 0.21 (0.03) |
| 105 | Porphyromonas sp._oral_taxon_284 | 0.18 (0.01) | 0.18 (0.02) | 0.19 (0.02) | 0.17 (0.02) |
| 106 | Selenomonas sp._oral_taxon_919 | 0.18 (0.01) | 0.18 (0.02) | 0.17 (0.02) | 0.20 (0.03) |
| 107 | Bergeyella sp._oral_taxon_322 | 0.18 (0.01) | 0.22 (0.02) | 0.19 (0.01) | 0.14 (0.01) |
| 108 | Leptotrichia sp._oral_taxon_498 | 0.18 (0.02) | 0.14 (0.03) | 0.16 (0.03) | 0.22 (0.04) |
| 109 | Kingella denitrificans | 0.17 (0.01) | 0.17 (0.04) | 0.17 (0.02) | 0.18 (0.02) |
| 110 | Prevotella maculosa | 0.17 (0.01) | 0.16 (0.02) | 0.16 (0.01) | 0.18 (0.01) |
| 111 | Atopobium rimae | 0.17 (0.01) | 0.12 (0.02) | 0.15 (0.02) | 0.21 (0.03) |
| 112 | Corynebacterium durum | 0.17 (0.01) | 0.24 (0.03) | 0.16 (0.01) | 0.13 (0.03) |
| 113 | TM7_[G-1] sp._oral_taxon_488 | 0.17 (0.02) | 0.23 (0.07) | 0.18 (0.02) | 0.11 (0.01) |
| 114 | Capnocytophaga sp._oral_taxon_336 | 0.17 (0.01) | 0.15 (0.02) | 0.17 (0.01) | 0.17 (0.02) |
| 115 | Selenomonas flueggei | 0.16 (0.01) | 0.15 (0.03) | 0.16 (0.02) | 0.18 (0.03) |
| 116 | Aggregatibacter sp._oral_taxon_458 | 0.16 (0.02) | 0.14 (0.02) | 0.16 (0.02) | 0.17 (0.03) |
| 117 | Fretibacterium sp._oral_taxon_362 | 0.16 (0.02) | 0.15 (0.04) | 0.18 (0.04) | 0.14 (0.03) |
| 118 | Neisseria subflava | 0.16 (0.02) | 0.14 (0.04) | 0.16 (0.04) | 0.17 (0.03) |
| 119 | Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yuri | 0.16 (0.01) | 0.18 (0.02) | 0.17 (0.01) | 0.12 (0.01) |
| 120 | TM7_[G-1] sp._oral_taxon_869 | 0.16 (0.03) | 0.15 (0.04) | 0.20 (0.06) | 0.11 (0.02) |
| 121 | Lachnoanaerobaculum saburreum | 0.15 (0.01) | 0.14 (0.02) | 0.15 (0.01) | 0.15 (0.01) |
| 122 | Prevotella oralis | 0.15 (0.01) | 0.09 (0.01) | 0.13 (0.01) | 0.20 (0.02) |
| 123 | TM7_[G-2] sp._oral_taxon_350 | 0.15 (0.02) | 0.12 (0.03) | 0.14 (0.02) | 0.17 (0.04) |
| 124 | Megasphaera sp._oral_taxon_123 | 0.14 (0.03) | 0.17 (0.05) | 0.12 (0.03) | 0.15 (0.06) |
| 125 | Aggregatibacter paraphrophilus | 0.14 (0.02) | 0.18 (0.06) | 0.18 (0.03) | 0.07 (0.02) |
| 126 | Desulfobulbus sp._oral_taxon_041 | 0.14 (0.01) | 0.11 (0.02) | 0.13 (0.02) | 0.17 (0.02) |
| 127 | Actinomyces massiliensis | 0.14 (0.01) | 0.18 (0.02) | 0.15 (0.02) | 0.10 (0.01) |
| 128 | Johnsonella ignava | 0.13 (0.01) | 0.13 (0.02) | 0.14 (0.01) | 0.13 (0.01) |
| 129 | Prevotella loescheii | 0.13 (0.01) | 0.15 (0.03) | 0.15 (0.02) | 0.09 (0.02) |
| 130 | Lachnospiraceae_[G-3] sp._oral_taxon_100 | 0.13 (0.01) | 0.12 (0.01) | 0.14 (0.01) | 0.12 (0.01) |
| 131 | Actinomyces johnsonii | 0.13 (0.01) | 0.12 (0.01) | 0.13 (0.02) | 0.12 (0.02) |
| 132 | TM7_[G-1] sp._oral_taxon_347 | 0.12 (0.02) | 0.16 (0.05) | 0.14 (0.02) | 0.08 (0.02) |
| 133 | Bacteroidetes_[G-5] sp._oral_taxon_511 | 0.12 (0.01) | 0.10 (0.02) | 0.13 (0.02) | 0.12 (0.02) |
| 134 | Actinomyces sp._oral_taxon_180 | 0.12 (0.01) | 0.13 (0.01) | 0.12 (0.01) | 0.10 (0.01) |
| 135 | Prevotella salivae | 0.12 (0.01) | 0.09 (0.02) | 0.12 (0.01) | 0.13 (0.02) |
| 136 | Actinomyces sp._oral_taxon_171 | 0.12 (0.01) | 0.12 (0.02) | 0.12 (0.01) | 0.11 (0.01) |
| 137 | Selenomonas sp._oral_taxon_146 | 0.12 (0.01) | 0.12 (0.02) | 0.11 (0.01) | 0.12 (0.01) |
| 138 | Abiotrophia defectiva | 0.12 (0.01) | 0.14 (0.03) | 0.13 (0.01) | 0.09 (0.01) |
| 139 | Pseudomonas fluorescens | 0.11 (0.05) | 0.07 (0.04) | 0.15 (0.10) | 0.10 (0.04) |
| 140 | Veillonella sp._oral_taxon_780 | 0.11 (0.02) | 0.16 (0.06) | 0.12 (0.04) | 0.08 (0.03) |
| 141 | Porphyromonas catoniae | 0.11 (0.01) | 0.13 (0.03) | 0.13 (0.02) | 0.08 (0.01) |
| 142 | Mitsuokella sp._oral_taxon_131 | 0.11 (0.02) | 0.05 (0.01) | 0.11 (0.03) | 0.14 (0.04) |
| 143 | Actinobaculum sp._oral_taxon_183 | 0.11 (0.01) | 0.12 (0.02) | 0.11 (0.01) | 0.09 (0.01) |
| 144 | Oribacterium sp._oral_taxon_078 | 0.11 (0.01) | 0.07 (0.01) | 0.10 (0.01) | 0.14 (0.01) |
| 145 | Treponema sp._oral_taxon_237 | 0.11 (0.01) | 0.11 (0.03) | 0.10 (0.02) | 0.11 (0.02) |
| 146 | Haemophilus sp._oral_taxon_036 | 0.10 (0.01) | 0.11 (0.03) | 0.10 (0.02) | 0.09 (0.02) |
| 147 | Leptotrichia sp._oral_taxon_215 | 0.10 (0.01) | 0.12 (0.02) | 0.10 (0.01) | 0.08 (0.01) |
| 148 | Prevotella histicola | 0.10 (0.01) | 0.06 (0.01) | 0.08 (0.02) | 0.15 (0.03) |
| 149 | TM7_[G-1] sp._oral_taxon_348 | 0.10 (0.01) | 0.08 (0.01) | 0.12 (0.01) | 0.09 (0.01) |
| 150 | Peptostreptococcus stomatis | 0.10 (0.01) | 0.11 (0.02) | 0.10 (0.01) | 0.08 (0.01) |
| 151 | Prevotella veroralis | 0.10 (0.01) | 0.08 (0.02) | 0.12 (0.02) | 0.08 (0.02) |
| 152 | Streptococcus sp._oral_taxon_056 | 0.10 (0.01) | 0.11 (0.02) | 0.09 (0.01) | 0.09 (0.01) |
| 153 | Selenomonas sp._oral_taxon_126 | 0.10 (0.01) | 0.09 (0.02) | 0.10 (0.01) | 0.09 (0.01) |
| 154 | Treponema sp._oral_taxon_231 | 0.09 (0.01) | 0.07 (0.01) | 0.10 (0.01) | 0.09 (0.01) |
| 155 | Neisseria bacilliformis | 0.09 (0.01) | 0.11 (0.04) | 0.08 (0.01) | 0.08 (0.02) |
| 156 | Actinomyces gerencseriae | 0.09 (0.01) | 0.09 (0.01) | 0.08 (0.01) | 0.09 (0.01) |
| 157 | Prevotella dentalis | 0.08 (0.01) | 0.08 (0.02) | 0.08 (0.02) | 0.08 (0.01) |
| 158 | Fusobacterium periodonticum | 0.08 (0.01) | 0.06 (0.01) | 0.09 (0.01) | 0.09 (0.01) |
| 159 | Prevotella pallens | 0.08 (0.01) | 0.08 (0.02) | 0.06 (0.01) | 0.11 (0.02) |
| 160 | Centipeda periodontii | 0.08 (0.01) | 0.05 (0.01) | 0.10 (0.01) | 0.08 (0.01) |
| 161 | Scardovia wiggsiae | 0.08 (0.01) | 0.09 (0.03) | 0.07 (0.02) | 0.09 (0.02) |
| 162 | Streptococcus sp._oral_taxon_074 | 0.08 (0.01) | 0.07 (0.01) | 0.09 (0.01) | 0.07 (0.01) |
| 163 | Haemophilus parahaemolyticus | 0.08 (0.02) | 0.09 (0.03) | 0.11 (0.03) | 0.04 (0.02) |
| 164 | Tannerella sp._oral_taxon_286 | 0.08 (0.00) | 0.06 (0.01) | 0.08 (0.01) | 0.08 (0.01) |
| 165 | Selenomonas sp._oral_taxon_936 | 0.08 (0.01) | 0.06 (0.01) | 0.07 (0.01) | 0.10 (0.02) |
| 166 | Actinomyces sp._oral_taxon_170 | 0.08 (0.01) | 0.06 (0.01) | 0.10 (0.02) | 0.06 (0.02) |
| 167 | Ruminococcaceae_[G-1] sp._oral_taxon_075 | 0.08 (0.01) | 0.09 (0.02) | 0.08 (0.01) | 0.07 (0.01) |
| 168 | Bifidobacterium dentium | 0.08 (0.01) | 0.07 (0.02) | 0.06 (0.01) | 0.10 (0.02) |
| 169 | Alloprevotella rava | 0.08 (0.01) | 0.07 (0.01) | 0.07 (0.01) | 0.09 (0.01) |
| 170 | Atopobium parvulum | 0.08 (0.01) | 0.06 (0.01) | 0.06 (0.01) | 0.11 (0.02) |
| 171 | Ottowia sp._oral_taxon_894 | 0.08 (0.01) | 0.08 (0.02) | 0.09 (0.01) | 0.06 (0.01) |
| 172 | Prevotella sp._oral_taxon_313 | 0.07 (0.01) | 0.09 (0.02) | 0.05 (0.01) | 0.10 (0.03) |
| 173 | TM7_[G-6] sp._oral_taxon_870 | 0.07 (0.01) | 0.08 (0.02) | 0.08 (0.01) | 0.06 (0.01) |
| 174 | Capnocytophaga sp._oral_taxon_864 | 0.07 (0.01) | 0.08 (0.01) | 0.08 (0.01) | 0.05 (0.01) |
| 175 | Actinomyces meyeri | 0.07 (0.00) | 0.08 (0.01) | 0.08 (0.01) | 0.06 (0.00) |
| 176 | Leptotrichia sp._oral_taxon_223 | 0.07 (0.01) | 0.05 (0.01) | 0.07 (0.02) | 0.09 (0.02) |
| 177 | Capnocytophaga sp._oral_taxon_338 | 0.07 (0.00) | 0.07 (0.01) | 0.07 (0.01) | 0.07 (0.01) |
| 178 | Streptococcus parasanguinis_I | 0.07 (0.01) | 0.06 (0.01) | 0.06 (0.01) | 0.08 (0.01) |
| 179 | Pseudoramibacter alactolyticus | 0.07 (0.01) | 0.10 (0.05) | 0.05 (0.01) | 0.07 (0.01) |
| 180 | Haemophilus haemolyticus | 0.07 (0.01) | 0.15 (0.05) | 0.05 (0.01) | 0.05 (0.01) |
| 181 | Neisseria pharyngis | 0.07 (0.02) | 0.06 (0.03) | 0.04 (0.02) | 0.10 (0.05) |
| 182 | Treponema maltophilum | 0.07 (0.00) | 0.06 (0.01) | 0.06 (0.00) | 0.08 (0.01) |
| 183 | Bradyrhizobium elkanii | 0.07 (0.02) | 0.12 (0.06) | 0.05 (0.01) | 0.05 (0.02) |
| 184 | Alloprevotella sp._oral_taxon_473 | 0.07 (0.01) | 0.05 (0.01) | 0.08 (0.02) | 0.06 (0.01) |
| 185 | Streptococcus lactarius | 0.06 (0.01) | 0.11 (0.04) | 0.05 (0.01) | 0.06 (0.01) |
| 186 | Prevotella sp._oral_taxon_292 | 0.06 (0.00) | 0.05 (0.01) | 0.06 (0.01) | 0.08 (0.01) |
| 187 | Capnocytophaga sp._oral_taxon_332 | 0.06 (0.01) | 0.08 (0.04) | 0.07 (0.01) | 0.05 (0.01) |
| 188 | Prevotella saccharolytica | 0.06 (0.00) | 0.06 (0.01) | 0.07 (0.01) | 0.06 (0.00) |
| 189 | Leptotrichia sp._oral_taxon_879 | 0.06 (0.02) | 0.14 (0.11) | 0.03 (0.01) | 0.05 (0.01) |
| 190 | Prevotella sp._oral_taxon_314 | 0.06 (0.01) | 0.05 (0.02) | 0.05 (0.01) | 0.07 (0.01) |
| 191 | Actinobaculum sp._oral_taxon_848 | 0.06 (0.00) | 0.04 (0.01) | 0.06 (0.01) | 0.06 (0.01) |
| 192 | Fretibacterium sp._oral_taxon_358 | 0.06 (0.01) | 0.04 (0.02) | 0.06 (0.02) | 0.06 (0.01) |
| 193 | Streptococcus sobrinus | 0.06 (0.01) | 0.00 (0.00) | 0.03 (0.01) | 0.12 (0.04) |
| 194 | Aggregatibacter actinomycetemcomitans | 0.06 (0.01) | 0.06 (0.02) | 0.06 (0.02) | 0.05 (0.02) |
| 195 | Treponema lecithinolyticum | 0.06 (0.01) | 0.06 (0.01) | 0.05 (0.01) | 0.06 (0.01) |
| 196 | Capnocytophaga sp._oral_taxon_902 | 0.06 (0.01) | 0.08 (0.02) | 0.05 (0.01) | 0.05 (0.01) |
| 197 | Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saph | 0.06 (0.01) | 0.04 (0.01) | 0.07 (0.01) | 0.05 (0.01) |
| 198 | Lachnoanaerobaculum umeaense | 0.06 (0.00) | 0.06 (0.01) | 0.06 (0.01) | 0.05 (0.01) |
| 199 | Peptostreptococcaceae_[XI][G-6] [Eubacterium]_noda | 0.05 (0.00) | 0.06 (0.01) | 0.05 (0.01) | 0.06 (0.01) |
| 200 | Veillonellaceae_[G-1] sp._oral_taxon_145 | 0.05 (0.01) | 0.04 (0.01) | 0.05 (0.01) | 0.06 (0.01) |
| 201 | TM7_[G-1] sp._oral_taxon_352 | 0.05 (0.01) | 0.05 (0.01) | 0.05 (0.01) | 0.06 (0.01) |
| 202 | Capnocytophaga sp._oral_taxon_412 | 0.05 (0.01) | 0.05 (0.01) | 0.05 (0.01) | 0.06 (0.01) |
| 203 | Gemella sanguinis | 0.05 (0.00) | 0.04 (0.01) | 0.05 (0.01) | 0.06 (0.01) |
| 204 | Aggregatibacter sp._oral_taxon_513 | 0.05 (0.01) | 0.03 (0.02) | 0.07 (0.01) | 0.04 (0.01) |
| 205 | Selenomonas sp._oral_taxon_133 | 0.05 (0.01) | 0.06 (0.02) | 0.05 (0.01) | 0.05 (0.01) |
| 206 | Granulicatella elegans | 0.05 (0.01) | 0.06 (0.01) | 0.05 (0.01) | 0.05 (0.01) |
| 207 | Veillonellaceae_[G-1] sp._oral_taxon_129 | 0.05 (0.01) | 0.03 (0.01) | 0.04 (0.01) | 0.07 (0.02) |
| 208 | Selenomonas dianae | 0.05 (0.01) | 0.04 (0.02) | 0.04 (0.01) | 0.07 (0.03) |
| 209 | Prevotella sp._oral_taxon_526 | 0.05 (0.01) | 0.02 (0.01) | 0.06 (0.02) | 0.05 (0.01) |
| 210 | Porphyromonas sp._oral_taxon_275 | 0.05 (0.01) | 0.04 (0.01) | 0.06 (0.01) | 0.03 (0.01) |
| 211 | Anaerolineae_[G-1] sp._oral_taxon_439 | 0.05 (0.01) | 0.04 (0.01) | 0.04 (0.01) | 0.06 (0.01) |
| 212 | Stomatobaculum longum | 0.05 (0.00) | 0.04 (0.01) | 0.04 (0.00) | 0.05 (0.01) |
| 213 | Olsenella sp._oral_taxon_807 | 0.04 (0.00) | 0.04 (0.01) | 0.04 (0.00) | 0.05 (0.00) |
| 214 | Capnocytophaga sp._oral_taxon_323 | 0.04 (0.00) | 0.03 (0.01) | 0.05 (0.01) | 0.05 (0.01) |
| 215 | Capnocytophaga sp._oral_taxon_903 | 0.04 (0.00) | 0.03 (0.01) | 0.04 (0.01) | 0.05 (0.01) |
| 216 | Fretibacterium sp._oral_taxon_361 | 0.04 (0.01) | 0.01 (0.00) | 0.05 (0.02) | 0.05 (0.02) |
| 217 | Leptotrichia sp._oral_taxon_219 | 0.04 (0.00) | 0.05 (0.02) | 0.04 (0.00) | 0.04 (0.01) |
| 218 | Prevotella sp._oral_taxon_306 | 0.04 (0.01) | 0.04 (0.02) | 0.03 (0.01) | 0.06 (0.01) |
| 219 | Atopobium sp._oral_taxon_199 | 0.04 (0.01) | 0.04 (0.01) | 0.04 (0.01) | 0.03 (0.01) |
| 220 | Capnocytophaga sp._oral_taxon_324 | 0.04 (0.01) | 0.03 (0.01) | 0.04 (0.01) | 0.05 (0.01) |
| 221 | Prevotella buccae | 0.04 (0.00) | 0.02 (0.00) | 0.04 (0.01) | 0.05 (0.01) |
| 222 | Prevotella baroniae | 0.04 (0.00) | 0.02 (0.01) | 0.04 (0.01) | 0.04 (0.01) |
| 223 | Lachnospiraceae_[G-8] sp._oral_taxon_500 | 0.04 (0.00) | 0.04 (0.01) | 0.04 (0.01) | 0.04 (0.00) |
| 224 | Prevotella sp._oral_taxon_376 | 0.04 (0.00) | 0.05 (0.01) | 0.04 (0.01) | 0.03 (0.01) |
| 225 | Porphyromonas sp._oral_taxon_278 | 0.04 (0.01) | 0.03 (0.01) | 0.04 (0.01) | 0.04 (0.01) |
| 226 | Solobacterium moorei | 0.04 (0.00) | 0.04 (0.00) | 0.04 (0.00) | 0.04 (0.00) |
| 227 | Campylobacter curvus | 0.03 (0.00) | 0.05 (0.01) | 0.03 (0.01) | 0.03 (0.01) |
| 228 | Prevotella micans | 0.03 (0.00) | 0.03 (0.01) | 0.03 (0.01) | 0.04 (0.01) |
| 229 | Bacteroidaceae_[G-1] sp._oral_taxon_272 | 0.03 (0.00) | 0.03 (0.01) | 0.03 (0.00) | 0.04 (0.01) |
| 230 | Streptococcus australis | 0.03 (0.00) | 0.03 (0.01) | 0.03 (0.00) | 0.04 (0.01) |
| 231 | Tannerella sp._oral_taxon_808 | 0.03 (0.00) | 0.02 (0.00) | 0.03 (0.00) | 0.04 (0.01) |
| 232 | Bergeyella sp._oral_taxon_907 | 0.03 (0.00) | 0.03 (0.01) | 0.04 (0.01) | 0.03 (0.00) |
| 233 | Prevotella multiformis | 0.03 (0.01) | 0.01 (0.00) | 0.03 (0.01) | 0.05 (0.02) |
| 234 | Fusobacterium sp._oral_taxon_370 | 0.03 (0.01) | 0.02 (0.01) | 0.04 (0.01) | 0.03 (0.01) |
| 235 | Capnocytophaga sp._oral_taxon_380 | 0.03 (0.01) | 0.03 (0.01) | 0.04 (0.01) | 0.03 (0.01) |
| 236 | Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infi | 0.03 (0.00) | 0.03 (0.01) | 0.03 (0.00) | 0.04 (0.00) |
| 237 | Treponema medium | 0.03 (0.00) | 0.03 (0.01) | 0.04 (0.01) | 0.02 (0.01) |
| 238 | Lachnoanaerobaculum orale | 0.03 (0.00) | 0.04 (0.01) | 0.02 (0.00) | 0.03 (0.01) |
| 239 | Alloprevotella sp._oral_taxon_308 | 0.03 (0.00) | 0.03 (0.00) | 0.03 (0.00) | 0.03 (0.01) |
| 240 | SR1_[G-1] sp._oral_taxon_874 | 0.03 (0.00) | 0.03 (0.00) | 0.03 (0.01) | 0.02 (0.00) |
| 241 | Actinomyces israelii | 0.03 (0.00) | 0.03 (0.00) | 0.03 (0.00) | 0.03 (0.00) |
| 242 | Shuttleworthia satelles | 0.03 (0.00) | 0.02 (0.01) | 0.03 (0.01) | 0.04 (0.01) |
| 243 | Mycoplasma salivarium | 0.03 (0.00) | 0.02 (0.00) | 0.03 (0.00) | 0.03 (0.00) |
| 244 | Leptotrichia goodfellowii | 0.03 (0.00) | 0.04 (0.01) | 0.03 (0.01) | 0.02 (0.00) |
| 245 | Streptococcus sinensis | 0.03 (0.00) | 0.03 (0.01) | 0.02 (0.00) | 0.04 (0.01) |
| 246 | TM7_[G-3] sp._oral_taxon_351 | 0.03 (0.00) | 0.02 (0.00) | 0.03 (0.00) | 0.03 (0.00) |
| 247 | Mitsuokella sp._oral_taxon_521 | 0.03 (0.01) | 0.01 (0.01) | 0.02 (0.01) | 0.04 (0.02) |
| 248 | Selenomonas sp._oral_taxon_442 | 0.03 (0.01) | 0.01 (0.00) | 0.04 (0.01) | 0.02 (0.01) |
| 249 | Actinomyces sp._oral_taxon_178 | 0.03 (0.00) | 0.02 (0.00) | 0.03 (0.00) | 0.03 (0.00) |
| 250 | Johnsonella sp._oral_taxon_166 | 0.02 (0.00) | 0.02 (0.01) | 0.03 (0.00) | 0.02 (0.00) |
| 251 | Lactobacillus gasseri | 0.02 (0.01) | 0.01 (0.00) | 0.02 (0.01) | 0.03 (0.01) |
| 252 | Treponema sp._oral_taxon_247 | 0.02 (0.01) | 0.01 (0.01) | 0.03 (0.01) | 0.02 (0.01) |
| 253 | GN02_[G-2] sp._oral_taxon_873 | 0.02 (0.00) | 0.03 (0.02) | 0.02 (0.01) | 0.02 (0.01) |
| 254 | Selenomonas sp._oral_taxon_937 | 0.02 (0.00) | 0.01 (0.00) | 0.02 (0.01) | 0.02 (0.00) |
| 255 | Atopobium sp._oral_taxon_416 | 0.02 (0.01) | 0.00 (0.00) | 0.01 (0.01) | 0.04 (0.02) |
| 256 | Sphingomonas echinoides | 0.02 (0.00) | 0.02 (0.01) | 0.02 (0.00) | 0.02 (0.01) |
| 257 | Butyrivibrio sp._oral_taxon_080 | 0.02 (0.00) | 0.02 (0.01) | 0.02 (0.01) | 0.02 (0.00) |
| 258 | Treponema vincentii | 0.02 (0.00) | 0.02 (0.00) | 0.03 (0.00) | 0.01 (0.00) |
| 259 | Selenomonas sp._oral_taxon_149 | 0.02 (0.00) | 0.01 (0.00) | 0.02 (0.01) | 0.02 (0.00) |
| 260 | Selenomonas sp._oral_taxon_478 | 0.02 (0.00) | 0.01 (0.00) | 0.01 (0.00) | 0.02 (0.01) |
| 261 | Prevotella sp._oral_taxon_475 | 0.02 (0.00) | 0.02 (0.01) | 0.02 (0.00) | 0.02 (0.01) |
| 262 | Pyramidobacter piscolens | 0.01 (0.00) | 0.01 (0.01) | 0.00 (0.00) | 0.01 (0.00) |
| 263 | Microbacterium flavescens | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) |
| 264 | Brevundimonas diminuta | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) |
| 265 | Sphingomonas sp._oral_taxon_006 | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) |
| 266 | Leptothrix sp._oral_taxon_025 | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) |
| 267 | Porphyrobacter tepidarius | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) | 0.00 (0.00) |
aBacteria in the table are rank ordered according to their mean relative abundance (%) in the overall cohort
Dashed line inserted below the top 20 taxa