Table 1. Assembly metrics for the separated gall wasp (Biorhiza pallida) and oak bud plus gall tissue (Quercus robur) transcriptomes.
| Assembly |
Gall wasp– B. pallida |
Oak—Q. robur |
|---|---|---|
| N50 * | 2338 | 1864 |
| Number of transcripts ** | 50708 | 178522 |
| Number of genes *** | 24916 | 53529 |
| Transcriptome span (Mb) | 78 | 232 |
| BUSCO complete (partial) % § | 97.7 (98.4) | 87.1 (98.0) |
* N50 is a weighted median contig length, such that 50% of the assembly is found in contigs of this length or greater.
** The total number of contigs produced by the TRINITY assembler.
*** The number of groups identified by TRINITY as representing separate loci.
§ BUSCO complete (and cumulative total including partially complete) genes after comparison to the Eukaryota database