TABLE 2.
Genome features relevant to specialized metabolism in S. jumonjinensis and S. katsurahamanus as compared to S. clavuligerus (CA producer) and S. pratensis (CA non-producer).
Feature | S. jumonjinensis NRRL 5741 | S. katsurahamanus T272 | S. clavuligerus ATCC27064 | S. pratensis ATCC 33331 |
Genome size (Mbp) | 8.47a | 7.25a | 8.56 | 7.34 |
Coding sequences | 7423 | 6123 | 7281 | 6537 |
SM BGCsb (PKS/NRPS)c | 49 (8/18) | 44 (9/9) | 43 (10/9) | 27 (5/9) |
a Estimated sizes based on sequence analysis from the current study. b Specialized metabolite (SM) biosynthetic gene clusters (BGCs) were predicted using antiSMASH 4.0. c Polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) genes were predicted using PRISM 3.