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. 2019 Nov 14;8(46):e01178-19. doi: 10.1128/MRA.01178-19

TABLE 1.

Statistics summary of the coassembled and reassembled USCα genomesa

CheckM output Beijerinckiaceae bin from coassembly USCα AHI genome from reassembly
Marker lineage o__Rhizobiales (UID3654) o__Rhizobiales (UID3654)
No. of genomes 92 92
No. of markers 481 481
No. of marker sets 319 319
    0 copies (missing) 36 32
    1 copy 444 449
    2 copies 1 0
    3 copies 0 0
    4 copies 0 0
    ≥5 copies 0 0
Completeness (%) 90.56 91.64
Contamination (%) 0.31 0.00
Strain heterogeneity (%) 0.00 0.00
No. of unique markers (of 43) 42 42
No. of multicopy markers 0 0
Insertion branch UID UID3666 UID3666
Taxonomy (contained) k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae k__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae
Taxonomy (sister) Unresolved Unresolved
GC content (%) 59.1 59
Genome size (Mbp) 3.03 3.26
Gene count 3,388 3,928
Coding density (fraction) 0.82 0.81
Translation table 11 11
No. of descendant genomes 3 3
Lineage
    GC content (%)
        Mean 60.6 60.6
        SD 2.6 2.6
    Genome size (Mbp)
        Mean 4.28 4.28
        SD 0.13 0.13
    Gene count
        Mean 3,861 3,861
        SD 86 86
a

Values that are different between the two draft genomes are marked in bold font.