FIG 3.

Validation of predicted fumC and fimH allele prevalences. (A) PLAP-predicted versus experimental within-sample fumC and fimH allele prevalences in 18 samples. Experimental allele prevalence was determined by CH typing of at least 40 single bacterial colonies per sample. Outliers (open circles) were outside the 99% confidence interval of the number of colonies sampled. (B) Predicted prevalence of fumC versus fimH alleles from the same CH type in 11 samples where no sharing of alleles between strains was present.