Table 3.

Alignment statistics

Aligner	Dataset	Bases mapped (Gb)	Mismatch rate	Coverage
minimap2	NA12878	77.5	1.97E−01	24.4
NGMLR	NA12878	73.6	1.92E−01	23.4
GraphMap	NA12878	80.2	2.17E−01	25.1
minimap2	CHM13	144.7	1.12E−01	43.7
NGMLR	CHM13	137.3	1.05E−01	42.0
GraphMap	CHM13	139.6	1.24E−01	42.7
minimap2	CHM1	128.6	1.35E−01	39.6
NGMLR	CHM1	127.6	1.35E−01	39.5
GraphMap	CHM1	130.4	1.52E−01	39.7
minimap2	Chr20	3.3	1.35E−01	48.5
NGMLR	Chr20	3.2	1.34E−01	47.4
GraphMap	Chr20	3.3	1.54E−01	49.1