Table 2.
Estimates of Evolutionary Divergence between the EHD6/Trinidad/2013 strain and the EHDV reference strain for different coding regions.
| Protein name | VP1 | VP2 | VP3 | VP4 | NS1 | VP5 | VP7 | NS2 | VP6 | NS3 |
|---|---|---|---|---|---|---|---|---|---|---|
| Segment | seq-1 | seg-2 | seg-3 | seg-4 | seg-5 | seg-6 | seg-7 | seg-8 | seg-9 | seg-10 |
| Length of the sequence compared (nt) | 3909 | 2964 | 2700 | 1935 | 1656 | 1587 | 1050 | 1122 | 1012 | 687 |
| EHD6_AUS1981/07 | 0.0213* | 0.0092* | 0.0234* | 0.0796 | 0.0252* | 0.0251* | 0.0235* | 1.2255 | 0.0271* | 0.0096* |
| EHD2_AUS1979/05 | 0.1266 | 1.5839 | 0.0555 | 0.0360* | 0.0605 | 0.4773 | 0.2686 | 1.2261 | 0.0701 | 0.0211 |
| EHD5_AUS1977/01 | 0.0330 | 1.5029 | 0.0291 | 0.0849 | 0.0340 | 0.6603 | 0.2801 | 1.2646 | 0.0292 | 0.0156 |
| EHD7_AUS1981/06 | 0.0381 | 1.5920 | 0.0499 | 0.0693 | 0.0334 | 0.4701 | 0.2584 | 1.2611 | 0.0521 | 0.1297 |
| EHD8_AUS1982/06 | 0.0668 | 0.6192 | 0.0828 | 0.0841 | 0.1570 | 0.1507 | 0.2824 | 1.3827 | 0.0754 | 0.1211 |
| EHD6_BAR1983/01 | 0.2758 | 0.5112 | 0.2496 | 0.3195 | 0.2521 | 0.2452 | 0.2954 | 0.3377 | 0.4112 | 0.1335 |
| EHD2_CAN1962/01 | 0.2873 | 1.6165 | 0.2436 | 0.3219 | 0.2422 | 0.4862 | 0.2924 | 0.1838 | 0.3952 | 0.1233 |
| EHD7_ISR2006/02 | 0.2789 | 1.5817 | 0.2436 | 0.3204 | 0.2558 | 0.4753 | 0.2575 | 0.3335 | 0.3965 | 0.1321 |
| EHD2_JAP1959/01 | 0.0584 | 1.6048 | 0.0725 | 0.0717 | 0.0685 | 0.4794 | 0.2691 | 1.0733 | 0.1212 | 0.0454 |
| EHD1_NIG1967/01 | 0.2789 | 1.5089 | 0.2424 | 0.3199 | 0.2509 | 0.6312 | 0.2967 | 0.1904 | 0.4035 | 0.1146 |
| EHD4_NIG1968/01 | 0.2825 | 1.5237 | 0.2395 | 0.3114 | 0.2531 | 0.6368 | 0.3211 | 0.5150 | 0.4045 | 0.1082 |
| EHD6_South_Africa_1996 | 0.2738 | 0.5132 | 0.2398 | 0.3131 | 0.2568 | 0.2511 | 0.3001 | 0.5326 | 0.3978 | 0.1391 |
| EHD1_USA1955/01 | 0.2842 | 1.4969 | 0.2450 | 0.3244 | 0.2423 | 0.6132 | 0.2988 | 0.1733* | 0.3960 | 0.1306 |
| EHD1_USA_1974 | 0.2850 | 1.4962 | 0.2457 | 0.3260 | 0.2422 | 0.6099 | 0.2988 | 0.1733* | 0.3956 | 0.1315 |
| EHD1_USA_1972 | 0.2842 | 1.4962 | 0.2456 | 0.3260 | 0.2422 | 0.6099 | 0.2988 | 0.1752 | 0.3993 | 0.1315 |
| EHD1_USA_2006 | 0.2888 | 1.5077 | 0.2399 | 0.3205 | 0.2496 | 0.6048 | 0.3003 | 0.1926 | 0.3926 | 0.1299 |
| EHD1_USA_2008 | 0.2877 | 1.5086 | 0.2400 | 0.3204 | 0.2435 | 0.6393 | 0.2956 | 0.1826 | 0.3956 | 0.1251 |
| EHD1_USA_2010 | 0.2910 | 1.5082 | 0.2464 | 0.3245 | 0.2459 | 0.6192 | 0.3020 | 0.1958 | 0.3947 | 0.1261 |
| EHD1_USA_2015 | 0.2879 | 1.5154 | 0.2475 | 0.3254 | 0.2502 | 0.6155 | 0.3000 | 0.1942 | 0.3994 | 0.1307 |
| EHD2_USA_1971 | 0.2855 | 1.6190 | 0.2490 | 0.3245 | 0.2420 | 0.4884 | 0.2854 | 0.1875 | 0.3886 | 0.1242 |
| EHD2_USA_1975 | 0.2880 | 1.6191 | 0.2414 | 0.3243 | 0.2413 | 0.4932 | 0.2954 | 0.1875 | 0.3943 | 0.1251 |
| EHD2_USA_1990 | 0.2874 | 1.6137 | 0.2399 | 0.3214 | 0.2423 | 0.4840 | 0.2850 | 0.1839 | 0.3939 | 0.1279 |
| EHD2_USA_1993 | 0.2874 | 1.6157 | 0.2404 | 0.3214 | 0.2431 | 0.4848 | 0.2850 | 0.1839 | 0.3956 | 0.1269 |
| EHD2_USA_2004 | 0.2920 | 1.6297 | 0.2441 | 0.3219 | 0.2483 | 0.4920 | 0.2938 | 0.1901 | 0.3902 | 0.1279 |
| EHD2_USA_2012 | 0.2904 | 1.6168 | 0.2416 | 0.3207 | 0.2388 | 0.4795 | 0.2923 | 0.2199 | 0.4027 | 0.1242 |
| EHD2_USA_2013 | 0.2921 | 1.6200 | 0.2420 | 0.3230 | 0.2387 | 0.4791 | 0.2901 | 0.2202 | 0.3972 | 0.1251 |
| EHD2_USA_2015 | 0.2920 | 1.6201 | 0.2420 | 0.3243 | 0.2363 | 0.4820 | 0.2917 | 0.2202 | 0.3993 | 0.1262 |
| EHD6_USA_2006 | 0.2888 | 0.0116 | 0.2426 | 0.3231 | 0.2390 | 0.0291 | 0.2882 | 0.2058 | 0.3889 | 0.1251 |
| EHD6_USA_2012 | 0.2882 | 0.0118 | 0.2458 | 0.3188 | 0.2435 | 0.0331 | 0.2821 | 0.2165 | 0.3977 | 0.1270 |
| EHD6_USA_2016 | 0.2862 | 0.0138 | 0.2473 | 0.3252 | 0.2452 | 0.0311 | 0.2890 | 0.2371 | 0.3947 | 0.1261 |
The pair of nucleotide sequences with the lowest evolutionary distance calculated was indicated by (*) for each segment.