Table 3.
Recombination events with the approximate breakpoint positions and mean P values for different recombination detection methods.
| Breakpoint positions in alignment |
Parental sequence |
Average P value for detection methods |
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Possible reassortant sequence | Beginning | End | Minor | Major | RDP | GENECONV | Bootscan | Maxchi | Chimaera | SiSscan | 3Seq |
| EHD6/Trinidad/2013 | 15,844 (corresponds to the beginning of NS2) | 17,090 (corresponds to the end of NS2) | Unknown | EHD6/AUS1981/07 | NS | 1.37E-119 | 6.25E-114 | 4.18E-38 | 8.14E-38 | 1.04E-33 | 2.00E-12 |
| EHD6/Trinidad/2013 | 9664 (corresponds to the beginning of VP4) | 11,470 (corresponds to the end of VP4) | EHD2/AUS1979/05 | EHD6/AUS1981/07 | NS | 3.44E-05 | 2.81E-18 | 7.35E-13 | 1.90E-14 | 7.62E-11 | NS |
NS, not significant.