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. Author manuscript; available in PMC: 2020 Apr 30.
Published in final edited form as: Nature. 2019 Oct 30;575(7781):234–237. doi: 10.1038/s41586-019-1703-4

Extended Data Table 2. Features of individual FA core complex subunits and structural models.

Protein Length (aa) Sequence features Models generated in this study Maps used for modelling Sequence identity / similarity between Gallus gallus and Homo sapiens (%)
FANCA 1,421 α-helical N/A N/A 49.1 / 65.6
FANCB 867 Possible (β-propeller, plus α-helical De novo modelling of SSEs* Focused map for top (EMD-10291), middle (EMD-10292), and base regions (EMD-10293), consensus map with T=5 (EMD-10290) and subcomplex map (EMD-10294) 44.1 / 63.2
FANCC 559 α-helical SSEs placed in maps, not assigned Focused map for base (EMD-10293) 49.0 / 65.1
FANCE 520 α-helical Crystal structure of human orthologue (C-terminal half; PDB 2ILR) SSEs placed in maps, not assigned Focused map for base (EMD-10293) 40.9 / 54.1
FANCF 350 α-helical Crystal structure of human orthologue (C-terminal half; PDB 2IQC) C-terminal region from homology model based on PDB 2IQC Focused map for base (EMD-10293) 38.5 / 51.6
FANCG 648 α-helical (TPR) TPR domain from homology model (I- TASSER) Focused map for top region (EMD-10291) 37.3 / 52.9
FANCL 373 ELF, URD and RING domains. Crystal structures of human (central domain, PDB 3ZQS; RING domain, PDB 4CCG) and Drosophila orthologues (full-length, PDB 3K1L) ELF domain in FANCLtop. ELF, URD and RING domains in FANCLbase. Homology models based on PDB 3K1L Focused map for top (EMD-10291) and base (EMD-10293) 69.9 / 82.7
FAAP100 888 Possible β-propeller, plus α-helical De novo modelling of SSEs Focused map for top (EMD-10291), middle (EMD-10292), and base regions (EMD-10293), consensus map with T=5 (EMD-10290) and subcomplex map (EMD-10294) 55.6 / 68.7

Footnote: * SSE, secondary structure elements