Table 1:
Summary of Trochodendron aralioides genome assembly and annotation
| Parameter | Draft scaffolds | Chromosome-length scaffolds based on Hi-C |
|---|---|---|
| Genome assembly | ||
| Length of genome (bp) | 1,623,741,898 | 1,530,107,441 |
| Number of contigs | 4,226 | 2,744 |
| Contigs N50 (bp) | 702,251 | 740,603 |
| Number of scaffolds | 1,469 | 19 |
| Scaffold N50 (bp) | 3,938,440 | 73,365,148 |
| Genome coverage (X) | 278.34 | 398.07 |
| Number of contigs (>100 kb) | 3,062 | 2,744 |
| Total length of contigs (>100 kb) | 1,567,464,199 | 1,523,319,687 |
| Mapping rate of contigs | 0.9779 | |
| Genome annotation | ||
| Protein-coding gene number | 35,328 | |
| Mean transcript length (kb) | 10,622.49 | |
| Mean exons per gene | 5.09 | |
| Mean exon length (bp) | 232.46 | |
| Mean intron length (bp) | 2,308.46 | |