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. Author manuscript; available in PMC: 2020 Sep 17.
Published in final edited form as: Biochemistry. 2019 Aug 29;58(37):3893–3902. doi: 10.1021/acs.biochem.9b00548

Table 1.

Steady-state kinetic parameters for Cj1424, Cj1425 and Cj1423a

Enzyme Substrate kcat (s−1) Km (μM) kcat/Km (M−1 s−1)
Cj1424b d-altro-heptulose-7-P (1) 0.14 ± 0.01 320 ± 25 (4.4 ± 0.4) × 102
Cj1425b d-glycero-d-manno-heptose-7-P (2)c 0.48 ± 0.01 103 ± 9 (4.7 ± 0.4) × 103
Cj1152d d-glycero-α-d-manno-heptose-1,7-bisphosphate (3) 0.12 ± 0.01 186 ± 25 (6.5 ± 1.0) × 102
GmhBe d-glycero-α-d-manno-heptose-1,7-bisphosphate (3) 4.6 ± 0.1 67 ± 1 (7.0 ± 0.1) × 104
GmhBe d-glycero-β-d-manno-heptose-1,7-bisphosphate 36.0 ± 0.2 5.0 ± 0.1 (7.2 ± 0.2) × 106
Cj1423f d-glycero-α-d-manno-heptose-1-P (4) 1.35 ± 0.04 495 ± 65 (2.7 ± 0.4) × 103
a

Errors were calculated from the standard deviation of the fitting results.

b

Reactions were monitored by UV coupled assay at pH 7.4 and 30 °C in the presence of NADH (300 μM), MgCl2 (5 mM), ATP (2 mM), PEP (1.0 mM), 1 U of lactate hydrogenase and pyruvate kinase.

c

The substrate for Cj1425, d-glycero-d-manno-heptose-7-P (2), was generated in situ using a 10-fold excess of Cj1424 and d-altro-heptulose-7-P (1). Kinetic constants were determined from the calculated concentrations of (2) using the equilibrium constant of 0.22 for the Cj1424 catalyzed reaction.

d

Reaction was followed by discontinuous UV assay using malachite green free phosphate detection at pH 7.5 at 25°C.

e

Reactions were monitored at pH 7.5 and 25 °C as previously reported (17).

f

Reaction was monitored by HPLC at pH 7.4 and 25 °C with GTP (1.0 mM), MgCl2 (2.0 mM) and pyrophosphatase (1 U).