Table 3.
Validation of the genotypic characterization
Consistent characterization with both methods was found for 1814 strains (out of 1843).
Phenotypic characterization |
Genotypic characterization |
||||
---|---|---|---|---|---|
Species |
Biotype or serotype |
No. |
Species |
Lineage |
No. |
2 |
2 |
||||
|
10 |
|
10 |
||
|
45 |
|
3 |
||
|
34 |
||||
|
8 |
||||
|
18 |
|
18 |
||
|
7 |
|
3 |
||
|
4 |
||||
|
1 |
1 |
1 |
||
|
4 |
|
4 |
||
|
9 |
|
9 |
||
1A |
573 |
1Aa |
565 |
||
|
1Ab |
8 |
|||
2/O:5–27 |
16 |
2/3-5a |
16 |
||
2/O:9 |
147 |
2/3-9a |
11 |
||
|
|
|
2/3-9b |
136 |
|
3/O:3 |
3 |
3-3b |
2 |
||
|
|
|
|
3–3 c |
1 |
4/O:3 |
950 |
4 |
950 |
||
O:3 |
1 |
14 |
1 |
||
O:1 |
26 |
2 |
3 |
||
4 |
2 |
||||
7 |
4 |
||||
10 |
5 |
||||
12 |
2 |
||||
15 |
6 |
||||
16 |
3 |
||||
17 |
1 |
||||
Yersinia sp. |
|
2 |
NEW 2 |
|
2 |
Total |
|
1814 |
|
|
1814 |